Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2541 |
Symbol | |
ID | 1170248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2672082 |
End bp | 2673407 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637344372 |
Product | response regulator |
Protein accession | NP_718127 |
Protein GI | 24374084 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACAC CATCTGAAAG CACTCTGCCA TTGATTCTAT GTGTAGACGA TGAAGCCAGT ATTCTAAAGT CGCTACAGCG ACTCTTTATC GGTAAGGATC TGCAGATCTT GTTAGCTGAT AGCGGTAGTA AAGCCTTAGA GCTGATGCTA GAGCATAGAG TAAATGTGAT CATCACCGAT ATGCGAATGC CGAATATGAC GGGTGCAGAA TTTCTGGCAA AAGCCGCTAT TTTACAACCC GATGCCTACC GCATTTTAAT GACAGGCTAT GCCGACCTTG CCTCCACTGT CTCGGCAATC AATCTTGGAA AGATCCATCG ATACGTTCAA AAGCCTTGGG ATAATCAAGA GTTGTTGACC GTGGTAGACG AAGGATTAGC GCTCTGCCAC TTAATTCGTC AAAACAAGCA ACTTACTGCC AAAGTCGCCA CACAAAATAA GCAGTTAAAG GAACTCAATA GTTCCCTCGA GGAAACTGTC CTAAAACGAA CGGAGCAACT TAAACAAACA CTTTTAAAAT TTAAACACCT AGCAGGTGAA AGGCAAAAGG ATGAAGCCGC CACCTTAGAA GTACTTTACA ACATCATCGT AAGTTATCCC CCACTCAGTG GTGAACTGGC CCGTAAAATC AGTGCCACCT GTGAATATCT CGCAAAAGCC TTGAAATTAC CCTCTGAGCT GGTCAATACC GTCACAAAAG CTGGGCTATT TTCAGAAATA GGCAAAATAG CGCTACCCAC CAAGATCGCA GAAACCGCTT ATACCGATCT CTATAATCGT GAACGTCGAC TATTTAATGA GCACCCCCTA CATGCCGAAG AAATTTTATT ACCAGCGCAG CATTTAAGCG AAATGTCGCT CATCATTGCC AATCAATTAG AACGTTACAA TGGTGGAGGA GAACCAGCAC AAAAAGCAGG AAACGATATC CCGCTAGGTT CTCGAATATT GGCAGTGGCG AGAGATTTTT GGCTACATGT AGAGGGCAGA TACGATGGCA ACAAAATGAG TATGATTGAT GCATTTGACG CTATACAGCT CCATCAAGGG AGTTATTACG ACCCTACGAT AGTCAACGCA TTATCTATCT TAGTTGCTTC TGAAGATGCA GACATAGCCA ATAGAGCCCG AAGAGGACTG GAAGTCAGTG CACTCAAGGC AGGAATGAAA TTAAAGCAAA ATCTGTACAA CCTTAAACAC ATCCTTCTCT TACCAGAAGG CCATGTGCTC ACTCCTGCTT CCCTTGAAAA ATTATCGAAA TATCAGCTAA AACATAAGGA GCAATTGCTG GTGGAAATAG AGACCACTGA GGGCGAAAAA CATTAA
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Protein sequence | MPTPSESTLP LILCVDDEAS ILKSLQRLFI GKDLQILLAD SGSKALELML EHRVNVIITD MRMPNMTGAE FLAKAAILQP DAYRILMTGY ADLASTVSAI NLGKIHRYVQ KPWDNQELLT VVDEGLALCH LIRQNKQLTA KVATQNKQLK ELNSSLEETV LKRTEQLKQT LLKFKHLAGE RQKDEAATLE VLYNIIVSYP PLSGELARKI SATCEYLAKA LKLPSELVNT VTKAGLFSEI GKIALPTKIA ETAYTDLYNR ERRLFNEHPL HAEEILLPAQ HLSEMSLIIA NQLERYNGGG EPAQKAGNDI PLGSRILAVA RDFWLHVEGR YDGNKMSMID AFDAIQLHQG SYYDPTIVNA LSILVASEDA DIANRARRGL EVSALKAGMK LKQNLYNLKH ILLLPEGHVL TPASLEKLSK YQLKHKEQLL VEIETTEGEK H
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