| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0726 |
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| Symbol | |
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| ID | 5136511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 751515 |
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| End bp | 753470 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532184 |
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| Product | response regulator |
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| Protein accession | YP_001216676 |
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| Protein GI | 147674922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000761968 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCGCT ACGCCCTGCT CATTTTAGAT AACAATCCGT TCAGTATTGA ACAATGGCGT
CAAGAACTGT CTGGTTTTGC CAGTAAATTC GACCTATGCA GCGCTGAATC TATTGATGAA
GCTCAGCAGT GGCTTGAATT TATTGAACAA CGTGAACAGA TCGCCGCGTT AGTTATCGCC
AGTCATCACG AAGCGCTCAA TGGTGCGGAT TTTTTGATTC GATTAGATAA AGTGGCGCAC
ACCAAACACG CTCGCAAAGT TCTGGTGAGT GGTGGACAAG ATATCCAAGC CATTCTGAGC
GCGGTCAACG AAGGTCGCTT AGACTACTGC TTGACTAAAC CACTGCAAGA TAACGTGCTA
CGCAAAACGG CTTTACAAGA ACTGACCTCC TTTGTACTTG AACACGATAA AGACAATATC
TTGAGCTACA GCACGGTGTT GGATCAGCAG CGTCTGTTAC GCGCGCACAT CGATAATAAA
ATGCGCAGCT ACCGTGAAGG ATTCATCACG GATTATCACC GCTTATCCGA TAGTGAATTA
GCCGAAAAAG TGATTGGTGC GCTGTACCAG TTTTTTGATG AGAAAGACGA GACTCAAGCG
TGCCGAACCT ATTCCGCGCA GCATTTACTG ACCGAAGAGG GCGAGCCTAA CCGTTTCTTA
TGGTTTATCA CCGAAGGCGA AGTGGCTTTA TATAAGCGAG ACGATCTTGG CCAACAGCGT
GAAGTGGTAC GCCATAAAAA AGGCAATATT ATCGGCGGTA TGTCATTTGT GACTGGCGAA
CCCTCTTTTT CGACTGCGAT CACCCTAACC CAGACTGAAG TGATAAAACT TGATCGTGAC
GTGTTCGCCA AAGTCATGCA CAACGACACC AGTCTACTGC CTCTGTTTAC CAACTTACTT
CTGCGCCATT TTAATCGTCG ATTGCAACGC AGTATTACCA CGAAACTTGA ACTGCAAAAA
ACGTTGGAGT CTTTAGAGTC TGCCCATCAA CAATTGATGG AGCGTGAAAA AATGGCGATG
TTAGGACAAC TGGTGGCAGG CGTTGCCCAC GAGTTGAATA ATCCGGTCGC TGCCATTTTG
CGCGGTACTG AAACCTTATC CAGCCATATT GGACATTTGA TTGAGGGTGA AGAGCGAGCG
CCAACCGAGC AATTAGGTGC GCAACTATTG CAAAAAGCCA TGCAGGCTAA GCCGATCTCC
ACTTCCGAAG AGCGTCACAA AGCCAAACAG TTAGAAGAGC TTATCCATCA CCGTTTAATC
GCCAAGAAAA TGGTCAAATT AGGCTTGGAT GACGATGAGG CCATGATCCA ACTCGCCAAA
AGCCGACCGG AAATAGCGCA AAAACAACTT GAACAGCTGG AAAGCTATCA CCTCACCGGC
AGTACTCTGC GTTCAATCCA AGTCTGTGCA CAGCGGATTG CTGACATGGT GAAAAGCCTT
AAAGGCTATG CACGTCCTGA CGATGAAACT TATCGACTCT CCGATATTCA TGAAGGGATA
GAAGATACCT TGGTCATTTT TGAAAATCGC CTAAAACGGC ATAGTGTCGA AAAAGAGTAC
GCACAATTAC CATTAATCTA TTGTTTGCCA ATTGCGCTAC AGCAAGTGTG GACTAATCTC
ATCTCAAATG CGATTGACGC TTTTCCTGAA CATGGCGTAT TGCGTATTGA AACCGAGCAG
CAACGTCGTC AAGATATCGA CTACGCCGTG ATTCGCTTCA CCGACAATGG TTGTGGCATT
CCACAAGCGT TACAGCAGAA GATTTTTGCC CTCAACTACA CTACCAAACG AGAAGGTAAC
TTTGGTCTTG GGATTGGCCT ATCTGTCTGT CAACAGATCA TTATGCAACA TCAAGGTTGG
ATTGATGTCG ACTCCCAACC TAACCACTAC ACCACCATGA CGGTGTGGCT GCCTTTAATG
GTATCCGCAC CCACCTTGGC AAGGAGCAAG CCATGA
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| Protein sequence | MNRYALLILD NNPFSIEQWR QELSGFASKF DLCSAESIDE AQQWLEFIEQ REQIAALVIA
SHHEALNGAD FLIRLDKVAH TKHARKVLVS GGQDIQAILS AVNEGRLDYC LTKPLQDNVL
RKTALQELTS FVLEHDKDNI LSYSTVLDQQ RLLRAHIDNK MRSYREGFIT DYHRLSDSEL
AEKVIGALYQ FFDEKDETQA CRTYSAQHLL TEEGEPNRFL WFITEGEVAL YKRDDLGQQR
EVVRHKKGNI IGGMSFVTGE PSFSTAITLT QTEVIKLDRD VFAKVMHNDT SLLPLFTNLL
LRHFNRRLQR SITTKLELQK TLESLESAHQ QLMEREKMAM LGQLVAGVAH ELNNPVAAIL
RGTETLSSHI GHLIEGEERA PTEQLGAQLL QKAMQAKPIS TSEERHKAKQ LEELIHHRLI
AKKMVKLGLD DDEAMIQLAK SRPEIAQKQL EQLESYHLTG STLRSIQVCA QRIADMVKSL
KGYARPDDET YRLSDIHEGI EDTLVIFENR LKRHSVEKEY AQLPLIYCLP IALQQVWTNL
ISNAIDAFPE HGVLRIETEQ QRRQDIDYAV IRFTDNGCGI PQALQQKIFA LNYTTKREGN
FGLGIGLSVC QQIIMQHQGW IDVDSQPNHY TTMTVWLPLM VSAPTLARSK P
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