Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3081 |
Symbol | |
ID | 6976515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3372260 |
End bp | 3374176 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643392589 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002277426 |
Protein GI | 209545197 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0200059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC GTCCCGTCGT CCTGCTGGTC GATGACGAAC CGGAAATCCT GGTGGCGCTG GGCGACCTGC TGGAGGATTC GTTCACCATC CTGTCCACCA CCTCGCCGGT CGAGGCGCTG GAGATCCTGG CCGGGCGCAG CGACGTCGAC GTCATCGTGT CCGACCAGCG CATGCCGGAA ATGGGCGGTG ACGTCATGCT GGCGCGGGCG CGCACCGTCT GCGACGCGCA GGCGATCCTG CTGACCGGCT ATGCCGATAT CGGCGCGGTG GCGGCGGCGC TGAACCAGGG GCGCATCTCG TTCTATTCCC ACAAGCCGTG GGACGGCGAC GCGCTGCGCG CCATGATCGT CCAGGCGGCG CATCGCCATC GGCTGGAAGG CGAACTGCAG ACCGAGCGGA TGCTGCTGCG GGGGTTGCAG CAGAATCTGC GCGCGGGCCT GGCGTTCAAG GACCCGCAGG GGCGCTTCAT CCGCATCAAC CGCAAGGCGG CCGCCTTCTA CGGGCGCGAC GAGGCCGCCT GCCTGGGACA GCGGGAGGAG GATGTGTGCG ACCCCGCCCA GCGTCCCGCC GTCCGTGAGG CCGAGGCCCG CCTGGCGGCC GAGGGCAAGG ACGAGGAGGT GATCGCCATT CCCGCGCCGG GAGGCGGGCT GTCCTGGCGG GAATTCACCC GGGTGCAACT GGACCGCAAT GCGCGCGGCG AGGCGTATTC CGTGCTGATC AACCGCGACA TCACCCGCCA GAGGGAGATG GAGGCCCGGC TGCGCCAGGC GGAGAAGATG CAGGCGCTGG GCACCATGGC CGGCGGGATC GCGCATGATT TCAACAATCT GCTGACGGCG GTGATGGGCT CGCTGGAACT GGCCACGGAC ATGGCCGACG GGCTGGACGA ACGGACGGCG CACCTGCTGG ACAACGCGAT GGCGGCGGCG CGGCGCGGGG CGGAACTGAC GCGGCGCCTG CTGAATTTCA GCCGGCCGCG CGACCTGAGC CTGCAGCCGG TGGACGTGAA CGCGCTGCTG CGCGGCATGC GCGATCTGCT GATGCAGGGC GTGACCTCGC GCCGGCGCGA CGGCAGCCAT GCGTCGTTCG ACATCCGCAT GGACAAACTG GCGCCGGACG GCGACCTGCC GCCGGCGCGC ACCGATGCCG GGCAACTGGA ACTGGCGCTT CTGAACCTGT GCATCAATGC CAGCGACGCC ATGCCCGACG GCGGGACCAT CACCCTGTCC ACGCGGGTGG CGCACCTGGA CGAACCGGCG GCCGAGGGCG AGCCCGCTTC GGGCGATTAC GTCGTGGTGT CGGTGGCCGA CCAGGGAACA GGCATGCCGC CCGAAACGGT GGCGCGGGTG TTCGAACCGT TCTTCACCAC CAAGGACGTG GGACGCGGGA CGGGGCTGGG GCTGTCGATG ATCTACGGCT TCGTGCGGCA TGTCGGCGGC GATGTCCGCG TGACCAGCGC GCCGGGGCAG GGCACGCGGG TGGATCTGTA TTTCCCGGTC CATCATCGCC AGGGCGGCGC ATCCGACCCC CGCGAGGCGG CGGAGCACGC GGCGGCCCCG CACGGGCTGC GGGTCCTGGT GGTCGATGAC GAGGACGCGG TGCGGGCCGT GACCGCCGGC TTCCTGCGCG GAATGGGCCA CCAGGCGATC GAGGCCCGGG GCGGCGAGGA CGCCCTGGCG CGGATCGCCG GCATGGCGCC CGATGTCCCC GACCTGGTGG TCATGGACGT GATGATGCCC CGGATGGACG GCGAGGAAGC GGCGCGCCGG ATTCGCGCGC ATTATCCGGG CAGCCGCATC CTGTTCCTGA CCGGCTATGC CGACGACACC ATCCTGCCCG ACGACGCCCT GGTGCTGCGC AAGCCCTTCA CCCAGGCGGA CCTGTCCCGC CATGTCAGCC GCGCGATGGC GGGCTGA
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Protein sequence | MTDRPVVLLV DDEPEILVAL GDLLEDSFTI LSTTSPVEAL EILAGRSDVD VIVSDQRMPE MGGDVMLARA RTVCDAQAIL LTGYADIGAV AAALNQGRIS FYSHKPWDGD ALRAMIVQAA HRHRLEGELQ TERMLLRGLQ QNLRAGLAFK DPQGRFIRIN RKAAAFYGRD EAACLGQREE DVCDPAQRPA VREAEARLAA EGKDEEVIAI PAPGGGLSWR EFTRVQLDRN ARGEAYSVLI NRDITRQREM EARLRQAEKM QALGTMAGGI AHDFNNLLTA VMGSLELATD MADGLDERTA HLLDNAMAAA RRGAELTRRL LNFSRPRDLS LQPVDVNALL RGMRDLLMQG VTSRRRDGSH ASFDIRMDKL APDGDLPPAR TDAGQLELAL LNLCINASDA MPDGGTITLS TRVAHLDEPA AEGEPASGDY VVVSVADQGT GMPPETVARV FEPFFTTKDV GRGTGLGLSM IYGFVRHVGG DVRVTSAPGQ GTRVDLYFPV HHRQGGASDP REAAEHAAAP HGLRVLVVDD EDAVRAVTAG FLRGMGHQAI EARGGEDALA RIAGMAPDVP DLVVMDVMMP RMDGEEAARR IRAHYPGSRI LFLTGYADDT ILPDDALVLR KPFTQADLSR HVSRAMAG
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