More than 300 homologs were found in PanDaTox collection
for query gene Sked_30920 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  100 
 
 
583 aa  1129    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  56 
 
 
535 aa  512  1e-144  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  59.94 
 
 
407 aa  357  3.9999999999999996e-97  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  50.42 
 
 
540 aa  342  1e-92  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  44.4 
 
 
533 aa  327  3e-88  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  43.45 
 
 
562 aa  324  3e-87  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  46.37 
 
 
537 aa  319  9e-86  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
623 aa  317  4e-85  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  44.22 
 
 
531 aa  313  3.9999999999999997e-84  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  46.47 
 
 
540 aa  310  6.999999999999999e-83  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  55.93 
 
 
518 aa  305  1.0000000000000001e-81  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  55.29 
 
 
394 aa  305  1.0000000000000001e-81  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  45.15 
 
 
530 aa  304  3.0000000000000004e-81  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  39.11 
 
 
545 aa  300  5e-80  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  52.74 
 
 
540 aa  295  2e-78  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  54.18 
 
 
543 aa  290  7e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
538 aa  289  1e-76  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  55.84 
 
 
538 aa  285  1.0000000000000001e-75  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
538 aa  281  2e-74  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  46.39 
 
 
542 aa  281  3e-74  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  52.66 
 
 
545 aa  273  4.0000000000000004e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
538 aa  273  9e-72  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  41.96 
 
 
533 aa  270  4e-71  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  58.6 
 
 
546 aa  264  4e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  47.22 
 
 
542 aa  254  4.0000000000000004e-66  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
544 aa  253  5.000000000000001e-66  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  53.48 
 
 
544 aa  253  7e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
535 aa  248  2e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  49.21 
 
 
522 aa  244  3e-63  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  50.89 
 
 
547 aa  244  3.9999999999999997e-63  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  45.86 
 
 
347 aa  241  4e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  39.59 
 
 
545 aa  240  5e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  51.37 
 
 
528 aa  236  8e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  50.16 
 
 
523 aa  235  2.0000000000000002e-60  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  48.73 
 
 
535 aa  231  4e-59  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
904 aa  228  2e-58  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  53.05 
 
 
540 aa  228  2e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  45.06 
 
 
702 aa  218  2e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
858 aa  212  1e-53  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
536 aa  209  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
532 aa  209  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  50.6 
 
 
1150 aa  206  9e-52  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
524 aa  201  1.9999999999999998e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  39.51 
 
 
531 aa  199  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
550 aa  199  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
538 aa  199  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
529 aa  198  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
545 aa  197  5.000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
715 aa  195  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  41.47 
 
 
526 aa  194  6e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  46.8 
 
 
965 aa  187  4e-46  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_013173  Dbac_1064  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
573 aa  186  1.0000000000000001e-45  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.223413  n/a   
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  46.98 
 
 
539 aa  186  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
530 aa  184  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
535 aa  184  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  42.53 
 
 
449 aa  178  2e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
625 aa  177  4e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.38 
 
 
533 aa  177  4e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  35.52 
 
 
686 aa  177  7e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.01 
 
 
650 aa  176  9.999999999999999e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
554 aa  173  9e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
586 aa  173  9e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  43.51 
 
 
397 aa  173  1e-41  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  42.39 
 
 
688 aa  171  5e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  36.1 
 
 
688 aa  170  5e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  48.83 
 
 
669 aa  170  6e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
657 aa  169  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_013093  Amir_4789  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
493 aa  169  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
564 aa  168  2e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
562 aa  169  2e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  46.18 
 
 
558 aa  168  2.9999999999999998e-40  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  35.84 
 
 
559 aa  167  4e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  42.22 
 
 
608 aa  167  4e-40  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  31.85 
 
 
562 aa  166  8e-40  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  37.57 
 
 
562 aa  166  1.0000000000000001e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  42.32 
 
 
676 aa  166  1.0000000000000001e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
563 aa  166  1.0000000000000001e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
561 aa  165  2.0000000000000002e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  35.17 
 
 
565 aa  165  2.0000000000000002e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  35.33 
 
 
656 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  35.89 
 
 
566 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  40 
 
 
566 aa  164  3e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
562 aa  164  4.0000000000000004e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  38.62 
 
 
515 aa  164  5.0000000000000005e-39  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
562 aa  163  7e-39  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
565 aa  163  7e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
561 aa  163  1e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
644 aa  162  2e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
563 aa  162  2e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.77 
 
 
574 aa  162  2e-38  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
567 aa  162  2e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
694 aa  162  2e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  39.44 
 
 
656 aa  162  2e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.69 
 
 
574 aa  162  2e-38  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.93 
 
 
558 aa  161  3e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  35.48 
 
 
711 aa  161  3e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
563 aa  161  4e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  35.51 
 
 
671 aa  161  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
561 aa  160  5e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
656 aa  160  5e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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