More than 300 homologs were found in PanDaTox collection
for query gene Dret_0342 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_2373  methyl-accepting chemotaxis sensory transducer  61.85 
 
 
718 aa  810    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  100 
 
 
699 aa  1420    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  39.2 
 
 
740 aa  454  1.0000000000000001e-126  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_007498  Pcar_2467  putative methyl-accepting chemotaxis protein (MCP)  36.65 
 
 
729 aa  409  1.0000000000000001e-112  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
702 aa  366  1e-100  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013223  Dret_1009  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.8 
 
 
569 aa  352  1e-95  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.103849  normal  0.0253995 
 
 
-
 
NC_007498  Pcar_1077  sensory box/GGDEF family protein  35.65 
 
 
808 aa  306  8.000000000000001e-82  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0659  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
798 aa  303  9e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3699  histidine kinase  35.88 
 
 
998 aa  293  5e-78  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  30.04 
 
 
715 aa  290  7e-77  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013223  Dret_1505  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
791 aa  286  1.0000000000000001e-75  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0144234 
 
 
-
 
NC_009664  Krad_1217  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
710 aa  286  1.0000000000000001e-75  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.142887  normal  0.0205131 
 
 
-
 
NC_013223  Dret_0660  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
675 aa  281  3e-74  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.84238 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
719 aa  278  2e-73  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3046  putative PAS/PAC sensor protein  39.09 
 
 
660 aa  277  4e-73  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  30.92 
 
 
733 aa  276  7e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_013223  Dret_0933  methyl-accepting chemotaxis sensory transducer  60.62 
 
 
780 aa  258  3e-67  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.156704 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
656 aa  257  5e-67  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  34 
 
 
662 aa  254  3e-66  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  32.85 
 
 
977 aa  252  1e-65  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
662 aa  252  2e-65  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  32.85 
 
 
661 aa  251  4e-65  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_010571  Oter_3353  methyl-accepting chemotaxis sensory transducer  50.54 
 
 
527 aa  241  5e-62  Opitutus terrae PB90-1  Bacteria  normal  0.416651  normal  0.952681 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  28.05 
 
 
686 aa  238  3e-61  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  30.46 
 
 
659 aa  238  3e-61  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  28.47 
 
 
672 aa  235  2.0000000000000002e-60  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0611  methyl-accepting chemotaxis sensory transducer  49.13 
 
 
547 aa  233  8.000000000000001e-60  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0657  methyl-accepting chemotaxis sensory transducer  53.42 
 
 
617 aa  232  2e-59  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0614  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
541 aa  231  4e-59  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  30.47 
 
 
646 aa  230  5e-59  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  28.03 
 
 
646 aa  230  7e-59  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0792  methyl-accepting chemotaxis sensory transducer  30.6 
 
 
651 aa  229  1e-58  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
680 aa  226  8e-58  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
584 aa  226  1e-57  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3437  methyl-accepting chemotaxis sensory transducer  27.67 
 
 
646 aa  224  3e-57  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.143807  n/a   
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  30.73 
 
 
660 aa  222  1.9999999999999999e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  30.73 
 
 
660 aa  222  1.9999999999999999e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  30.73 
 
 
660 aa  222  1.9999999999999999e-56  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_010571  Oter_0384  methyl-accepting chemotaxis sensory transducer  50.18 
 
 
671 aa  221  3e-56  Opitutus terrae PB90-1  Bacteria  normal  normal  0.916816 
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
660 aa  220  7.999999999999999e-56  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
832 aa  218  2.9999999999999998e-55  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_010571  Oter_0364  methyl-accepting chemotaxis sensory transducer  49.2 
 
 
561 aa  218  4e-55  Opitutus terrae PB90-1  Bacteria  normal  0.056342  normal  0.0235537 
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  30.12 
 
 
660 aa  218  4e-55  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0815  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
538 aa  217  5e-55  Opitutus terrae PB90-1  Bacteria  normal  0.260319  normal  0.290459 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  28.66 
 
 
643 aa  216  9.999999999999999e-55  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
587 aa  211  3e-53  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
544 aa  211  4e-53  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  47.08 
 
 
600 aa  208  2e-52  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
674 aa  208  3e-52  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4504  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
521 aa  207  7e-52  Opitutus terrae PB90-1  Bacteria  normal  normal  0.249783 
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
908 aa  206  8e-52  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  30 
 
 
674 aa  206  9e-52  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  55.86 
 
 
905 aa  205  2e-51  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
585 aa  204  3e-51  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  55.86 
 
 
905 aa  205  3e-51  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  28.99 
 
 
676 aa  204  6e-51  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.93 
 
 
566 aa  204  6e-51  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
659 aa  203  8e-51  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  28.82 
 
 
678 aa  202  9.999999999999999e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
517 aa  202  9.999999999999999e-51  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  46.04 
 
 
516 aa  202  1.9999999999999998e-50  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  47.64 
 
 
740 aa  201  3e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
520 aa  201  5e-50  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  52.46 
 
 
572 aa  200  6e-50  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  33 
 
 
541 aa  200  7.999999999999999e-50  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
541 aa  199  1.0000000000000001e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
517 aa  199  1.0000000000000001e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
541 aa  199  1.0000000000000001e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
517 aa  198  2.0000000000000003e-49  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  52.51 
 
 
702 aa  199  2.0000000000000003e-49  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1989  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
556 aa  198  2.0000000000000003e-49  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00286784  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  52.72 
 
 
586 aa  198  3e-49  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
517 aa  198  3e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_012912  Dd1591_0792  methyl-accepting chemotaxis sensory transducer  44.36 
 
 
542 aa  197  4.0000000000000005e-49  Dickeya zeae Ech1591  Bacteria  normal  0.821346  n/a   
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  45.52 
 
 
557 aa  197  5.000000000000001e-49  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  33.11 
 
 
515 aa  197  5.000000000000001e-49  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  52.5 
 
 
559 aa  197  7e-49  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  34.06 
 
 
513 aa  196  8.000000000000001e-49  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.57 
 
 
584 aa  196  1e-48  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  36.32 
 
 
584 aa  196  1e-48  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  32.89 
 
 
517 aa  196  1e-48  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
527 aa  195  2e-48  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  47.2 
 
 
508 aa  196  2e-48  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  32.75 
 
 
519 aa  196  2e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  48.99 
 
 
569 aa  195  3e-48  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
559 aa  195  3e-48  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1991  chemotaxis sensory transducer  45.14 
 
 
661 aa  194  3e-48  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  33.84 
 
 
464 aa  194  4e-48  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  40.4 
 
 
706 aa  194  4e-48  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  31.97 
 
 
517 aa  194  5e-48  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  31.97 
 
 
517 aa  194  5e-48  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0167  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
681 aa  194  5e-48  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_4099  methyl-accepting chemotaxis sensory transducer  48.41 
 
 
522 aa  194  6e-48  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  49.59 
 
 
559 aa  194  6e-48  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  50.41 
 
 
744 aa  194  6e-48  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  48.31 
 
 
542 aa  194  6e-48  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
513 aa  194  6e-48  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  44.7 
 
 
543 aa  193  9e-48  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
610 aa  193  9e-48  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0826  methyl-accepting chemotaxis sensory transducer  44.75 
 
 
529 aa  193  9e-48  Dickeya dadantii Ech703  Bacteria  normal  0.227259  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>