More than 300 homologs were found in PanDaTox collection
for query gene Caci_8200 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013131  Caci_8200  two component transcriptional regulator, winged helix family  100 
 
 		 249 aa  481  1e-135  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8478  two component transcriptional regulator, winged helix family  70.21 
 
 		 230 aa  317  7.999999999999999e-86  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5637  two component transcriptional regulator, winged helix family  42.53 
 
 		 224 aa  140  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0682808 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  40.49 
 
 		 231 aa  123  3e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.000343135 
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  37.5 
 
 		 237 aa  122  5e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1539  response regulator receiver protein  41.71 
 
 		 219 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.596696  normal  0.26981 
 
 
-
 
NC_014210  Ndas_4514  two component transcriptional regulator, winged helix family  39.37 
 
 		 225 aa  122  8e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.592764 
 
 
-
 
NC_007333  Tfu_1238  response regulator receiver  40.57 
 
 		 218 aa  115  3.9999999999999997e-25  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_1447  two component transcriptional regulator, winged helix family  38.62 
 
 		 222 aa  116  3.9999999999999997e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_3539  two component transcriptional regulator, winged helix family  38.1 
 
 		 268 aa  115  8.999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.224989  normal  1 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  37.93 
 
 		 229 aa  114  1.0000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2207  two component transcriptional regulator, winged helix family  39.5 
 
 		 244 aa  114  1.0000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  38.67 
 
 		 226 aa  114  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.01 
 
 		 231 aa  114  2.0000000000000002e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  36.32 
 
 		 235 aa  114  2.0000000000000002e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3826  response regulator receiver  36.22 
 
 		 228 aa  114  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  0.0204609  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  37.68 
 
 		 242 aa  114  2.0000000000000002e-24  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_002977  MCA2330  DNA-binding response regulator  33.62 
 
 		 228 aa  113  3e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_3104  two component transcriptional regulator  38.68 
 
 		 233 aa  113  3e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.317177  normal  1 
 
 
-
 
NC_011886  Achl_0715  two component transcriptional regulator, winged helix family  38.33 
 
 		 224 aa  113  3e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  33.94 
 
 		 234 aa  113  3e-24  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  34.47 
 
 		 224 aa  113  3e-24  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  35.53 
 
 		 226 aa  112  4.0000000000000004e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_1693  two component transcriptional regulator  43.41 
 
 		 229 aa  112  5e-24  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000234642 
 
 
-
 
NC_007777  Francci3_3029  two component transcriptional regulator  40.11 
 
 		 265 aa  112  7.000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  1  normal  0.253727 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  37.39 
 
 		 230 aa  111  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  41.67 
 
 		 234 aa  111  1.0000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_2351  two component transcriptional regulator, winged helix family  37.95 
 
 		 231 aa  110  1.0000000000000001e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.274912  n/a   
 
 
-
 
NC_013093  Amir_5698  two component transcriptional regulator, winged helix family  40.56 
 
 		 222 aa  111  1.0000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  41.67 
 
 		 234 aa  111  1.0000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0299  two component transcriptional regulator, winged helix family  36.52 
 
 		 231 aa  110  2.0000000000000002e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.867846 
 
 
-
 
NC_013757  Gobs_1316  two component transcriptional regulator, winged helix family  38.5 
 
 		 232 aa  110  2.0000000000000002e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1263  two component transcriptional regulator  31.85 
 
 		 256 aa  110  2.0000000000000002e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_5331  transcriptional regulator two components regulatory system  33.62 
 
 		 225 aa  110  2.0000000000000002e-23  Cupriavidus metallidurans CH34  Bacteria  normal  0.0274603  normal  1 
 
 
-
 
NC_013093  Amir_2151  two component transcriptional regulator, winged helix family  38.76 
 
 		 217 aa  110  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000920449  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  37.74 
 
 		 236 aa  110  2.0000000000000002e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_011145  AnaeK_0939  two component transcriptional regulator, winged helix family  38.68 
 
 		 231 aa  110  3e-23  Anaeromyxobacter sp. K  Bacteria  normal  0.102691  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  36.97 
 
 		 226 aa  110  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_013441  Gbro_4088  response regulator receiver  34.93 
 
 		 231 aa  109  4.0000000000000004e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  33.33 
 
 		 234 aa  109  4.0000000000000004e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  31.51 
 
 		 238 aa  109  5e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  41.67 
 
 		 245 aa  108  5e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  33.77 
 
 		 231 aa  108  6e-23  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0942  two component transcriptional regulator, winged helix family  38.21 
 
 		 231 aa  108  7.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0532517  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  36.11 
 
 		 230 aa  108  7.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  34.4 
 
 		 235 aa  108  7.000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  34.5 
 
 		 226 aa  108  7.000000000000001e-23  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  36.96 
 
 		 231 aa  108  8.000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4422  response regulator receiver  35.81 
 
 		 237 aa  108  8.000000000000001e-23  Nocardioides sp. JS614  Bacteria  normal  0.259959  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  36.97 
 
 		 229 aa  108  8.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  37.78 
 
 		 228 aa  108  9.000000000000001e-23  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  37.78 
 
 		 228 aa  108  9.000000000000001e-23  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  37.78 
 
 		 228 aa  108  9.000000000000001e-23  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.682961 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  37.33 
 
 		 230 aa  107  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal  1 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  34.07 
 
 		 226 aa  108  1e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  36.4 
 
 		 236 aa  107  1e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_2604  response regulator receiver  40.33 
 
 		 244 aa  107  2e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88392  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  34.41 
 
 		 226 aa  107  2e-22  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.575064 
 
 
-
 
NC_007604  Synpcc7942_2466  two component transcriptional regulator  37.26 
 
 		 235 aa  107  2e-22  Synechococcus elongatus PCC 7942  Bacteria  normal  0.28267  hitchhiker  0.0000000000126243 
 
 
-
 
NC_007760  Adeh_0891  two component transcriptional regulator  37.74 
 
 		 231 aa  107  2e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.391375  n/a   
 
 
-
 
NC_008025  Dgeo_2318  two component transcriptional regulator  36.49 
 
 		 225 aa  107  2e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.642935  normal  1 
 
 
-
 
NC_013441  Gbro_4233  response regulator receiver  40.33 
 
 		 244 aa  107  2e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  36.94 
 
 		 236 aa  107  2e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  32 
 
 		 227 aa  107  2e-22  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  35.05 
 
 		 245 aa  107  2e-22  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  34.26 
 
 		 232 aa  107  2e-22  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_3537  two component transcriptional regulator, winged helix family  37.79 
 
 		 237 aa  106  3e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  0.555413 
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  32.88 
 
 		 225 aa  106  3e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.19 
 
 		 229 aa  106  3e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_008541  Arth_0587  two component transcriptional regulator  39.43 
 
 		 222 aa  107  3e-22  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  35.05 
 
 		 245 aa  107  3e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal  1 
 
 
-
 
NC_013169  Ksed_08590  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  36.76 
 
 		 239 aa  106  3e-22  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.857083 
 
 
-
 
NC_014248  Aazo_2789  winged helix family two component transcriptional regulator  32.63 
 
 		 256 aa  106  4e-22  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  34.68 
 
 		 231 aa  106  4e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  30.88 
 
 		 223 aa  105  5e-22  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  31.44 
 
 		 240 aa  105  5e-22  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  30.77 
 
 		 237 aa  105  5e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011366  Rleg2_5840  two component transcriptional regulator, winged helix family  36.79 
 
 		 230 aa  105  5e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.99298  normal  1 
 
 
-
 
NC_013411  GYMC61_0402  two component transcriptional regulator, winged helix family  31 
 
 		 241 aa  105  5e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  31.86 
 
 		 223 aa  105  5e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  37.79 
 
 		 236 aa  105  5e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  unclonable  0.0000000182155 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  33.52 
 
 		 223 aa  105  5e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3288  two component transcriptional regulator  32.42 
 
 		 225 aa  105  6e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0366247  n/a   
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  40.56 
 
 		 223 aa  105  6e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_2514  two component transcriptional regulator, winged helix family  37.25 
 
 		 226 aa  105  7e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.24701  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  40.76 
 
 		 229 aa  105  7e-22  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  34.72 
 
 		 230 aa  105  7e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_007963  Csal_1783  two component transcriptional regulator  40 
 
 		 220 aa  105  7e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_0669  two component transcriptional regulator  35.85 
 
 		 253 aa  105  7e-22  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.193178 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  30.88 
 
 		 223 aa  105  8e-22  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  35.19 
 
 		 230 aa  105  8e-22  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  33.98 
 
 		 236 aa  105  8e-22  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  30.88 
 
 		 223 aa  105  8e-22  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_0557  response regulator receiver  36.67 
 
 		 234 aa  105  8e-22  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  35.24 
 
 		 229 aa  105  9e-22  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_011725  BCB4264_A3709  DNA-binding response regulator  32.42 
 
 		 225 aa  105  9e-22  Bacillus cereus B4264  Bacteria  unclonable  0.0000227696  n/a   
 
 
-
 
NC_011772  BCG9842_B1606  DNA-binding response regulator  32.42 
 
 		 225 aa  105  9e-22  Bacillus cereus G9842  Bacteria  hitchhiker  0.00543423  hitchhiker  0.0000000112462 
 
 
-
 
NC_006274  BCZK3308  transcriptional regulatory protein  32.42 
 
 		 225 aa  104  1e-21  Bacillus cereus E33L  Bacteria  hitchhiker  0.000872353  n/a   
 
 
-
 
NC_011726  PCC8801_1416  two component transcriptional regulator, winged helix family  33.83 
 
 		 225 aa  104  1e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  34.66 
 
 		 225 aa  104  1e-21  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
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