| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0557 |
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| Symbol | |
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| ID | 4016931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 631241 |
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| End bp | 631945 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954542 |
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| Product | response regulator receiver |
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| Protein accession | YP_561570 |
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| Protein GI | 91791919 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGTTG AAAAACACAT ATTAGTGGTG GAAGACGATA CCTCACTGGC TGAGTGGATC
AGTGATTATT TATTGGATCA TGGCTATGGG GTGACAGTTG CGAGTCAAGG TGATTACGCC
TTGGAAATGA TTGCCGATGA GCTACCTGAC TTGGTGCTAC TTGATGTCAT GATCCCAGTA
AAAAATGGTT TCGATGTCTG CAAAGAGGCG AGGGAATTCT ATTCTGGACC TATCTTATTT
ATGACGGCCT GCGTTGAAGA TGGCGACGAA ATTCAGGGGC TGGAAATGGG CGCCGATGAT
TACCTCACTA AACCCATTCG GCCGCAAGTC TTGCTGGCTC GGATTAAAGC GCTATTGCGC
CGTGCCAGTG ATGAAGAGCC TAAACAGCAG TTGGTATTTG GCGCGCTAGT GCTTAATGCT
ACCGCGAAAA CCGTCACGGT TCATCAGCAA GCTGTAGGGC TTAATGACAA TGAATTCGAT
GTGTTATGGC TGCTGGCACT GCAGGCTGGC ACAGTGGTGA GTCGCATCGA TTTAGTGTCA
CAGCTTAGGG GTATAGAATA TGATGGCCTA GATCGCTCTG TGGATATTCG CGTGTCGCGG
CTGCGTAAAA AACTTCAAGA AGCTCAAGAC CAGCCCTATA AAGTTAAAAC CATTCGTGGT
AAAGGTTACT TGTTTTGCCG CGATGACGCA GCGCCCAAAT CATGA
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| Protein sequence | MTVEKHILVV EDDTSLAEWI SDYLLDHGYG VTVASQGDYA LEMIADELPD LVLLDVMIPV
KNGFDVCKEA REFYSGPILF MTACVEDGDE IQGLEMGADD YLTKPIRPQV LLARIKALLR
RASDEEPKQQ LVFGALVLNA TAKTVTVHQQ AVGLNDNEFD VLWLLALQAG TVVSRIDLVS
QLRGIEYDGL DRSVDIRVSR LRKKLQEAQD QPYKVKTIRG KGYLFCRDDA APKS
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