Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0669 |
Symbol | |
ID | 4254981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 787614 |
End bp | 788375 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121283 |
Product | two component transcriptional regulator |
Protein accession | YP_736729 |
Protein GI | 114046179 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.193178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCAA ACCAGCCAAC CCACAATTCC ACGTTTTCCC CTTTCAAAAT GGAAGGTGCG GTGCAGATCC TATTGGTCGA AGACGAGCAG GATCTGGCTC AGATGATTAT GGTGAATCTC ACAGCCCTCA ATTTTCGGGT CTTTCACGCC GCCTCTCTGC ATCAGGCCAA CGCTTTGCTG CAGGCCAAAC GCATCGATTT GGTGCTGCTC GACCGTATGC TGCCTGATGG CGACGGTTTG TTGTTGTGCC AGCAACTAAG GAACGACGGA CAACAAATGC CAGTGATGTT GCTCACCGCC CGCGACGGTG AGGCCGATAC AGTGCTAGGG CTCGAAAGCG GCGCCGACGA CTATATGACC AAACCCTTCA GCGTGCTTGA ACTCAGGGCC AGAACCAAAG CACTGCTTCG CCGTCACCTC TCCGCCGCCC CAACAAGGCA GTTGATTGAA TTTGAGGGGC TTCGCATCGA TTTGGATTCC CGTGAAGTCA TTGCCTTTGA TAATCCCTTA TCGCTAACCG CCAAAGAGTT TGATTTACTA ACCTTTCTTG CCCGTCATCC CCAACAGGTT TTCAGCCGTA CCCAACTGCT CGATGCGGTG TGGGGGTATC GCTTCGATGG TTTTGAACAT ACAGTAAACA GTCATATCAA TCGTTTACGC GGCAAACTTG CCCATATTCC AGGCTCCCGC GAGCTGGTGC AGACCGTATG GGGTGTGGGC TATAAATTTA CCTTACCCAG CATGCAGGCA GCGTTGCACT GA
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Protein sequence | MMPNQPTHNS TFSPFKMEGA VQILLVEDEQ DLAQMIMVNL TALNFRVFHA ASLHQANALL QAKRIDLVLL DRMLPDGDGL LLCQQLRNDG QQMPVMLLTA RDGEADTVLG LESGADDYMT KPFSVLELRA RTKALLRRHL SAAPTRQLIE FEGLRIDLDS REVIAFDNPL SLTAKEFDLL TFLARHPQQV FSRTQLLDAV WGYRFDGFEH TVNSHINRLR GKLAHIPGSR ELVQTVWGVG YKFTLPSMQA ALH
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