More than 300 homologs were found in PanDaTox collection
for query gene Tfu_1501 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007333  Tfu_1501  response regulator  100 
 
 		 206 aa  410  1e-114  Thermobifida fusca YX  Bacteria  normal  0.117784  n/a   
 
 
-
 
NC_014210  Ndas_1389  putative two component transcriptional regulator, winged helix family  44.62 
 
 		 171 aa  108  6e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.287988  hitchhiker  0.00961108 
 
 
-
 
NC_014165  Tbis_2331  putative winged helix family two component transcriptional regulator  42.36 
 
 		 166 aa  102  3e-21  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.836335 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  53.26 
 
 		 261 aa  91.7  6e-18  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  42.11 
 
 		 239 aa  90.5  1e-17  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  44.86 
 
 		 232 aa  90.5  2e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  41.75 
 
 		 266 aa  90.1  2e-17  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  49 
 
 		 232 aa  89.7  3e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  52.33 
 
 		 232 aa  89.7  3e-17  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  48.89 
 
 		 240 aa  87.4  1e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  46.59 
 
 		 236 aa  87  2e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  42.99 
 
 		 243 aa  85.9  3e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  43.52 
 
 		 239 aa  85.5  4e-16  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  43.56 
 
 		 296 aa  85.5  5e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  47.37 
 
 		 270 aa  85.5  5e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  45.92 
 
 		 249 aa  85.5  5e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  41.86 
 
 		 255 aa  85.5  5e-16  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  41.09 
 
 		 257 aa  85.1  7e-16  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  41.09 
 
 		 257 aa  85.1  7e-16  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  41.09 
 
 		 257 aa  85.1  7e-16  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  42.99 
 
 		 241 aa  84.7  8e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.26 
 
 		 249 aa  84.7  8e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  45.36 
 
 		 237 aa  84.3  0.000000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  46.46 
 
 		 250 aa  84.7  0.000000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  44.83 
 
 		 227 aa  84  0.000000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  48.86 
 
 		 259 aa  84  0.000000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  50 
 
 		 243 aa  83.2  0.000000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  42.2 
 
 		 248 aa  84  0.000000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  44.44 
 
 		 251 aa  83.2  0.000000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  35.45 
 
 		 229 aa  83.6  0.000000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  47.73 
 
 		 261 aa  83.6  0.000000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  50.56 
 
 		 265 aa  83.6  0.000000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  47.31 
 
 		 278 aa  83.6  0.000000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  47.78 
 
 		 237 aa  83.2  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  46.59 
 
 		 257 aa  82.8  0.000000000000003  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  47.31 
 
 		 267 aa  82.8  0.000000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  43.14 
 
 		 236 aa  82.4  0.000000000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  46.67 
 
 		 255 aa  82  0.000000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  45.45 
 
 		 250 aa  81.6  0.000000000000007  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  47.83 
 
 		 243 aa  81.6  0.000000000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  45.45 
 
 		 247 aa  81.6  0.000000000000008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_009921  Franean1_7218  winged helix family two component response transcriptional regulator  49.47 
 
 		 124 aa  80.9  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.18436  normal  1 
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  41.76 
 
 		 238 aa  80.1  0.00000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  46.59 
 
 		 253 aa  80.1  0.00000000000002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  46.67 
 
 		 258 aa  80.5  0.00000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2671  two component transcriptional regulator, winged helix family  47.83 
 
 		 243 aa  80.5  0.00000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  33.66 
 
 		 227 aa  80.5  0.00000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  40.78 
 
 		 227 aa  80.1  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_014230  CA2559_01810  transcriptional regulatory protein  38.38 
 
 		 226 aa  80.1  0.00000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0432  putative two component transcriptional regulator, winged helix family  41.75 
 
 		 224 aa  79.3  0.00000000000003  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000490664  normal  1 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  46.59 
 
 		 217 aa  79.3  0.00000000000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  42.86 
 
 		 256 aa  79.3  0.00000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  44.12 
 
 		 223 aa  78.6  0.00000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  36.09 
 
 		 235 aa  79  0.00000000000005  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.203788 
 
 
-
 
NC_010581  Bind_3413  two component transcriptional regulator  45.92 
 
 		 252 aa  77.4  0.0000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.427436 
 
 
-
 
NC_009513  Lreu_0416  two component transcriptional regulator  37.21 
 
 		 239 aa  77.4  0.0000000000001  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00027457  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  44.32 
 
 		 264 aa  76.6  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  39.22 
 
 		 224 aa  77  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  43.33 
 
 		 236 aa  76.6  0.0000000000002  Magnetococcus sp. MC-1  Bacteria  normal  1  decreased coverage  0.00391258 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.32 
 
 		 224 aa  77  0.0000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  37.29 
 
 		 229 aa  76.6  0.0000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.258551 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  42.39 
 
 		 230 aa  75.9  0.0000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  47.13 
 
 		 230 aa  75.5  0.0000000000005  Caulobacter sp. K31  Bacteria  normal  1  normal  0.281853 
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  41.76 
 
 		 242 aa  75.5  0.0000000000005  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  47.13 
 
 		 272 aa  75.5  0.0000000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal  1 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  45.56 
 
 		 230 aa  74.7  0.0000000000009  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5055  two component transcriptional regulator  47.22 
 
 		 223 aa  74.3  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  49.45 
 
 		 229 aa  74.3  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  33.67 
 
 		 229 aa  74.7  0.000000000001  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0993  two component transcriptional regulator, winged helix family  36.63 
 
 		 237 aa  73.6  0.000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5433  DNA-binding response regulator  47.22 
 
 		 223 aa  73.9  0.000000000002  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR2143  phosphate regulon transcriptional regulatory protein Phob  42.7 
 
 		 228 aa  73.6  0.000000000002  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_04480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.73 
 
 		 232 aa  73.2  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.226813 
 
 
-
 
NC_008025  Dgeo_1522  two component transcriptional regulator  42.24 
 
 		 227 aa  73.6  0.000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_1493  two component transcriptional regulator  42.27 
 
 		 232 aa  73.9  0.000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.12584  normal  0.340507 
 
 
-
 
NC_009505  BOV_2058  phosphate regulon transcriptional regulatory protein PhoB  42.7 
 
 		 228 aa  73.2  0.000000000003  Brucella ovis ATCC 25840  Bacteria  normal  0.275433  n/a   
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  45.35 
 
 		 235 aa  73.2  0.000000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_013946  Mrub_1539  two component transcriptional regulator, winged helix family  43.43 
 
 		 222 aa  73.2  0.000000000003  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.0000287281  normal  0.103291 
 
 
-
 
NC_009441  Fjoh_0544  two component transcriptional regulator  33.67 
 
 		 227 aa  72.8  0.000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  45 
 
 		 224 aa  72.8  0.000000000003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_003909  BCE_5379  DNA-binding response regulator  44.16 
 
 		 223 aa  72.4  0.000000000004  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_3794  two component transcriptional regulator  45.45 
 
 		 223 aa  72.4  0.000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0280755  n/a   
 
 
-
 
NC_011772  BCG9842_B5569  DNA-binding response regulator  45.83 
 
 		 223 aa  72.8  0.000000000004  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A5385  DNA-binding response regulator  45.83 
 
 		 223 aa  72.8  0.000000000004  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_2637  two component transcriptional regulator, winged helix family  40.82 
 
 		 227 aa  72.8  0.000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_5353  DNA-binding response regulator  45.83 
 
 		 223 aa  72.4  0.000000000005  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK4959  DNA-binding response regulator  44.16 
 
 		 223 aa  72.4  0.000000000005  Bacillus cereus E33L  Bacteria  hitchhiker  0.000160223  n/a   
 
 
-
 
NC_009667  Oant_0766  two component transcriptional regulator  43.82 
 
 		 228 aa  72  0.000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0291358  n/a   
 
 
-
 
NC_008009  Acid345_2990  two component transcriptional regulator  46.67 
 
 		 230 aa  72  0.000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.140246 
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  39.13 
 
 		 225 aa  72.4  0.000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  40.23 
 
 		 223 aa  72  0.000000000006  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_1191  response regulator  40.23 
 
 		 223 aa  72  0.000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4944  DNA-binding response regulator  44.16 
 
 		 223 aa  72  0.000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0109954  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  40.23 
 
 		 223 aa  72  0.000000000006  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_3430  two component transcriptional regulator, winged helix family  40.38 
 
 		 231 aa  72  0.000000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  40 
 
 		 225 aa  72  0.000000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  42.7 
 
 		 229 aa  72  0.000000000006  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal  1 
 
 
-
 
NC_009664  Krad_1230  two component transcriptional regulator, winged helix family  44.21 
 
 		 254 aa  72  0.000000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211629  normal  0.177188 
 
 
-
 
NC_010184  BcerKBAB4_2977  two component transcriptional regulator  40.7 
 
 		 223 aa  71.6  0.000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0131031  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  43.96 
 
 		 232 aa  71.6  0.000000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
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