More than 300 homologs were found in PanDaTox collection
for query gene Smed_2371 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_2371  binding-protein-dependent transport systems inner membrane component  100 
 
 
294 aa  583  1.0000000000000001e-165  Sinorhizobium medicae WSM419  Bacteria  normal  0.91742  normal  0.325627 
 
 
-
 
NC_011989  Avi_3459  ABC transporter  77 
 
 
288 aa  427  1e-119  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0345  binding-protein-dependent transport systems inner membrane component  72.51 
 
 
297 aa  414  9.999999999999999e-116  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  71.99 
 
 
287 aa  409  1e-113  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2045  binding-protein-dependent transport systems inner membrane component  75.96 
 
 
312 aa  403  1e-111  Chelativorans sp. BNC1  Bacteria  normal  0.613322  n/a   
 
 
-
 
NC_007493  RSP_0181  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  72.7 
 
 
311 aa  395  1e-109  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.121482  n/a   
 
 
-
 
NC_009049  Rsph17029_1814  binding-protein-dependent transport systems inner membrane component  72.7 
 
 
287 aa  395  1e-109  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0476587  normal  0.305557 
 
 
-
 
NC_009952  Dshi_1372  binding-protein-dependent transport systems inner membrane component  68.9 
 
 
305 aa  392  1e-108  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.856164  normal  0.860518 
 
 
-
 
NC_012850  Rleg_3296  binding-protein-dependent transport systems inner membrane component  60.19 
 
 
309 aa  370  1e-101  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.913784  normal  0.0841796 
 
 
-
 
NC_011369  Rleg2_3041  binding-protein-dependent transport systems inner membrane component  60.84 
 
 
314 aa  369  1e-101  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.819345  normal 
 
 
-
 
NC_008044  TM1040_1495  binding-protein-dependent transport systems inner membrane component  64.98 
 
 
305 aa  346  2e-94  Ruegeria sp. TM1040  Bacteria  normal  0.473602  normal 
 
 
-
 
NC_007802  Jann_2701  binding-protein-dependent transport systems inner membrane component  61.59 
 
 
315 aa  331  1e-89  Jannaschia sp. CCS1  Bacteria  normal  0.725502  normal  0.78823 
 
 
-
 
NC_010725  Mpop_1082  binding-protein-dependent transport systems inner membrane component  60.54 
 
 
305 aa  328  5.0000000000000004e-89  Methylobacterium populi BJ001  Bacteria  normal  0.779888  normal  0.0329883 
 
 
-
 
NC_011757  Mchl_2051  binding-protein-dependent transport systems inner membrane component  60.07 
 
 
305 aa  315  6e-85  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_010172  Mext_1732  binding-protein-dependent transport systems inner membrane component  59.73 
 
 
302 aa  314  9.999999999999999e-85  Methylobacterium extorquens PA1  Bacteria  normal  0.244285  normal 
 
 
-
 
NC_007643  Rru_A3454  binding-protein dependent transport system inner membrane protein  54.77 
 
 
298 aa  300  2e-80  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0036  binding-protein-dependent transport systems inner membrane component  49.83 
 
 
292 aa  292  6e-78  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6032  putative ABC transporter, permease protein  57.99 
 
 
285 aa  268  8e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  42.31 
 
 
275 aa  194  2e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  43.24 
 
 
307 aa  186  3e-46  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
268 aa  130  3e-29  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
258 aa  124  3e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  38.95 
 
 
273 aa  120  1.9999999999999998e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
256 aa  118  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  41.14 
 
 
281 aa  118  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
283 aa  116  3.9999999999999997e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  40.26 
 
 
273 aa  115  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
254 aa  114  2.0000000000000002e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
274 aa  112  6e-24  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
246 aa  111  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
257 aa  111  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
254 aa  112  1.0000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
268 aa  110  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  32.31 
 
 
266 aa  109  4.0000000000000004e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
265 aa  110  4.0000000000000004e-23  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
282 aa  108  9.000000000000001e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  32.47 
 
 
266 aa  108  1e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  34.55 
 
 
251 aa  107  2e-22  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  35.98 
 
 
251 aa  107  2e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  34.55 
 
 
250 aa  107  3e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.55 
 
 
250 aa  106  4e-22  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.55 
 
 
250 aa  106  4e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.55 
 
 
250 aa  106  4e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.55 
 
 
250 aa  106  5e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.55 
 
 
250 aa  106  5e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
258 aa  104  1e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
288 aa  105  1e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
251 aa  104  1e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
257 aa  105  1e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  34.55 
 
 
250 aa  104  1e-21  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_013521  Sked_24180  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.48 
 
 
302 aa  103  2e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  33.49 
 
 
279 aa  104  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
306 aa  102  7e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  27.36 
 
 
263 aa  102  1e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
257 aa  101  1e-20  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  29.26 
 
 
298 aa  101  1e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
243 aa  101  1e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
253 aa  101  1e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
280 aa  100  2e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
278 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.16 
 
 
308 aa  101  2e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
253 aa  100  3e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  29.78 
 
 
282 aa  100  4e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  32.12 
 
 
251 aa  99.8  4e-20  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  31.73 
 
 
261 aa  98.6  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
260 aa  98.6  1e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
285 aa  98.6  1e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
264 aa  97.8  2e-19  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  29.7 
 
 
264 aa  96.7  4e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
362 aa  96.7  5e-19  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
258 aa  95.9  8e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
264 aa  95.9  8e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
255 aa  95.5  8e-19  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
281 aa  95.5  9e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  31.58 
 
 
284 aa  95.5  9e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
271 aa  95.5  1e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  29.38 
 
 
254 aa  95.1  1e-18  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
286 aa  95.1  1e-18  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
268 aa  94.7  2e-18  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.91 
 
 
249 aa  93.6  3e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
322 aa  93.2  5e-18  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  32.55 
 
 
259 aa  93.2  5e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
284 aa  93.2  5e-18  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  34.22 
 
 
272 aa  92.8  7e-18  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  33.19 
 
 
247 aa  92.4  9e-18  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
272 aa  92  9e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
275 aa  92.4  9e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  30.59 
 
 
257 aa  91.7  1e-17  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
255 aa  92  1e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  29.77 
 
 
265 aa  91.7  1e-17  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  30.56 
 
 
255 aa  91.3  2e-17  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
250 aa  91.3  2e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  35.92 
 
 
277 aa  90.9  2e-17  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
288 aa  90.9  2e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_012669  Bcav_2576  binding-protein-dependent transport systems inner membrane component  37.85 
 
 
306 aa  91.3  2e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
254 aa  90.9  3e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
289 aa  90.9  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  31.47 
 
 
262 aa  90.9  3e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
256 aa  90.1  4e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
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