More than 300 homologs were found in PanDaTox collection
for query gene Rleg_3296 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_3296  binding-protein-dependent transport systems inner membrane component  100 
 
 
309 aa  615  1e-175  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.913784  normal  0.0841796 
 
 
-
 
NC_011369  Rleg2_3041  binding-protein-dependent transport systems inner membrane component  95.47 
 
 
314 aa  596  1e-169  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.819345  normal 
 
 
-
 
NC_009636  Smed_2371  binding-protein-dependent transport systems inner membrane component  60.19 
 
 
294 aa  356  1.9999999999999998e-97  Sinorhizobium medicae WSM419  Bacteria  normal  0.91742  normal  0.325627 
 
 
-
 
NC_009667  Oant_0345  binding-protein-dependent transport systems inner membrane component  60.07 
 
 
297 aa  343  2e-93  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3459  ABC transporter  58.14 
 
 
288 aa  343  2.9999999999999997e-93  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  57.24 
 
 
287 aa  335  5.999999999999999e-91  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0181  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  57.24 
 
 
311 aa  320  1.9999999999999998e-86  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.121482  n/a   
 
 
-
 
NC_009049  Rsph17029_1814  binding-protein-dependent transport systems inner membrane component  57.24 
 
 
287 aa  320  3e-86  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0476587  normal  0.305557 
 
 
-
 
NC_009952  Dshi_1372  binding-protein-dependent transport systems inner membrane component  53.97 
 
 
305 aa  314  9.999999999999999e-85  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.856164  normal  0.860518 
 
 
-
 
NC_008254  Meso_2045  binding-protein-dependent transport systems inner membrane component  56.95 
 
 
312 aa  310  2e-83  Chelativorans sp. BNC1  Bacteria  normal  0.613322  n/a   
 
 
-
 
NC_008044  TM1040_1495  binding-protein-dependent transport systems inner membrane component  51.24 
 
 
305 aa  276  3e-73  Ruegeria sp. TM1040  Bacteria  normal  0.473602  normal 
 
 
-
 
NC_010172  Mext_1732  binding-protein-dependent transport systems inner membrane component  52.3 
 
 
302 aa  276  4e-73  Methylobacterium extorquens PA1  Bacteria  normal  0.244285  normal 
 
 
-
 
NC_007802  Jann_2701  binding-protein-dependent transport systems inner membrane component  52.92 
 
 
315 aa  275  1.0000000000000001e-72  Jannaschia sp. CCS1  Bacteria  normal  0.725502  normal  0.78823 
 
 
-
 
NC_010725  Mpop_1082  binding-protein-dependent transport systems inner membrane component  50.5 
 
 
305 aa  272  6e-72  Methylobacterium populi BJ001  Bacteria  normal  0.779888  normal  0.0329883 
 
 
-
 
NC_011757  Mchl_2051  binding-protein-dependent transport systems inner membrane component  51.29 
 
 
305 aa  265  8e-70  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_007643  Rru_A3454  binding-protein dependent transport system inner membrane protein  47.87 
 
 
298 aa  263  3e-69  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0036  binding-protein-dependent transport systems inner membrane component  42.12 
 
 
292 aa  245  6e-64  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6032  putative ABC transporter, permease protein  49.18 
 
 
285 aa  221  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
275 aa  172  5e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
307 aa  170  2e-41  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
258 aa  124  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
268 aa  118  9.999999999999999e-26  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
273 aa  114  3e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  35.06 
 
 
281 aa  112  6e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
283 aa  111  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
273 aa  110  4.0000000000000004e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
274 aa  106  5e-22  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
254 aa  105  9e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
257 aa  103  3e-21  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  33.6 
 
 
279 aa  103  4e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  29.92 
 
 
251 aa  102  9e-21  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_013521  Sked_24180  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.84 
 
 
302 aa  102  9e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
264 aa  101  2e-20  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  29.53 
 
 
250 aa  100  3e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  29.53 
 
 
251 aa  100  3e-20  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  29.84 
 
 
250 aa  100  4e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  30.31 
 
 
250 aa  100  4e-20  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  29.84 
 
 
250 aa  99.8  5e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  29.84 
 
 
250 aa  100  5e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  29.84 
 
 
250 aa  99.8  5e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
250 aa  99.8  5e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  29.84 
 
 
250 aa  99.4  6e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
258 aa  99.4  7e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
264 aa  99.4  7e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
264 aa  99.4  8e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
251 aa  99  1e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  30.38 
 
 
261 aa  97.4  2e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  30.49 
 
 
266 aa  97.4  3e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  30.49 
 
 
266 aa  96.7  5e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
246 aa  96.3  6e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  28.68 
 
 
256 aa  94.7  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
265 aa  94.7  2e-18  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  29.67 
 
 
254 aa  94.4  3e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
362 aa  93.6  4e-18  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
271 aa  93.6  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
306 aa  93.6  4e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  30.47 
 
 
282 aa  92.8  6e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
250 aa  92.8  7e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2576  binding-protein-dependent transport systems inner membrane component  35 
 
 
306 aa  92.4  9e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
280 aa  92.4  9e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  26.85 
 
 
298 aa  91.7  1e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  27.68 
 
 
282 aa  92  1e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  31.15 
 
 
265 aa  90.9  2e-17  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  28.4 
 
 
288 aa  90.9  2e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  28.14 
 
 
263 aa  90.5  3e-17  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
289 aa  90.5  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
257 aa  90.1  4e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
281 aa  90.1  5e-17  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
255 aa  89.7  6e-17  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
286 aa  88.2  2e-16  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1434  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
321 aa  87  3e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.441348  normal  0.835016 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  27.31 
 
 
322 aa  87.4  3e-16  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  32.04 
 
 
288 aa  87  3e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  28.4 
 
 
284 aa  87  4e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
257 aa  87  4e-16  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
275 aa  86.3  7e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
268 aa  85.5  0.000000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  28.64 
 
 
268 aa  84.3  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
245 aa  84.3  0.000000000000002  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  29.47 
 
 
262 aa  84.7  0.000000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
260 aa  84  0.000000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  27.97 
 
 
256 aa  84  0.000000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
253 aa  84  0.000000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
285 aa  82.8  0.000000000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  28.12 
 
 
250 aa  82.8  0.000000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  30.96 
 
 
277 aa  81.6  0.00000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
286 aa  81.6  0.00000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  26.01 
 
 
308 aa  82.4  0.00000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
255 aa  81.3  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  25.58 
 
 
260 aa  81.3  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
275 aa  81.3  0.00000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  26.86 
 
 
375 aa  80.9  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  25.59 
 
 
281 aa  80.5  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
258 aa  80.5  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  28.22 
 
 
265 aa  80.1  0.00000000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  29.56 
 
 
257 aa  80.5  0.00000000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
266 aa  80.5  0.00000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  29.56 
 
 
255 aa  80.1  0.00000000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  28.22 
 
 
265 aa  80.1  0.00000000000005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  26.19 
 
 
251 aa  79.7  0.00000000000005  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
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