More than 300 homologs were found in PanDaTox collection
for query gene Rmar_0071 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  100 
 
 
525 aa  1056    Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  29.5 
 
 
696 aa  199  7e-50  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  29.36 
 
 
696 aa  196  1e-48  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  27.74 
 
 
695 aa  187  4e-46  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  27.2 
 
 
525 aa  178  3e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  26.44 
 
 
707 aa  177  6e-43  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  25.33 
 
 
514 aa  175  1.9999999999999998e-42  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  26.21 
 
 
534 aa  175  1.9999999999999998e-42  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  29.78 
 
 
538 aa  174  3.9999999999999995e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  29.4 
 
 
533 aa  174  5e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  28.57 
 
 
534 aa  174  5e-42  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  26.89 
 
 
693 aa  173  6.999999999999999e-42  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  26.89 
 
 
693 aa  173  7.999999999999999e-42  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  25.49 
 
 
522 aa  172  1e-41  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  29.29 
 
 
535 aa  170  7e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  25.79 
 
 
698 aa  169  9e-41  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  25.19 
 
 
526 aa  168  2e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  24.9 
 
 
527 aa  168  2.9999999999999998e-40  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  29.52 
 
 
524 aa  167  4e-40  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  27.12 
 
 
527 aa  166  1.0000000000000001e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  25 
 
 
522 aa  165  2.0000000000000002e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  27.5 
 
 
534 aa  164  4.0000000000000004e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  25 
 
 
522 aa  164  4.0000000000000004e-39  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  24.8 
 
 
522 aa  164  4.0000000000000004e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  24.46 
 
 
523 aa  164  4.0000000000000004e-39  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  25 
 
 
522 aa  164  5.0000000000000005e-39  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  28.06 
 
 
546 aa  161  3e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  24.6 
 
 
523 aa  160  7e-38  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  24.6 
 
 
523 aa  159  1e-37  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  29.33 
 
 
602 aa  149  1.0000000000000001e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  27.65 
 
 
598 aa  148  2.0000000000000003e-34  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  26.44 
 
 
470 aa  137  5e-31  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  26.22 
 
 
470 aa  135  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  26.22 
 
 
505 aa  134  3e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  26.86 
 
 
470 aa  134  3e-30  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  23.15 
 
 
715 aa  133  9e-30  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  23.75 
 
 
475 aa  131  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  24.95 
 
 
511 aa  130  6e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  28.81 
 
 
511 aa  126  8.000000000000001e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  25.49 
 
 
573 aa  126  1e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  25.9 
 
 
468 aa  125  2e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  25.16 
 
 
495 aa  119  9e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  24.9 
 
 
598 aa  119  9.999999999999999e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  25.31 
 
 
598 aa  119  9.999999999999999e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  26.55 
 
 
487 aa  118  3e-25  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  24.84 
 
 
468 aa  117  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  24.84 
 
 
476 aa  117  5e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  24.84 
 
 
468 aa  117  5e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  25.05 
 
 
454 aa  117  6.9999999999999995e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  26.26 
 
 
468 aa  116  1.0000000000000001e-24  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  24.05 
 
 
474 aa  111  3e-23  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  24.05 
 
 
482 aa  110  5e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  22.93 
 
 
448 aa  109  1e-22  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
578 aa  108  2e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
578 aa  108  3e-22  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  26.4 
 
 
484 aa  107  5e-22  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
578 aa  106  9e-22  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  26 
 
 
481 aa  105  2e-21  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_007796  Mhun_2069  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.49 
 
 
700 aa  104  4e-21  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008228  Patl_0068  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
648 aa  103  9e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2639  methyl-accepting chemotaxis sensory transducer  34.84 
 
 
864 aa  102  3e-20  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013158  Huta_1186  methyl-accepting chemotaxis sensory transducer  30.12 
 
 
298 aa  100  6e-20  Halorhabdus utahensis DSM 12940  Archaea  normal  0.141917  n/a   
 
 
-
 
NC_011832  Mpal_1328  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
543 aa  100  6e-20  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  29.83 
 
 
543 aa  99.8  1e-19  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_010718  Nther_2449  methyl-accepting chemotaxis sensory transducer  24.64 
 
 
493 aa  97.8  5e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  36.71 
 
 
521 aa  97.4  5e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2382  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
871 aa  97.8  5e-19  Halorhabdus utahensis DSM 12940  Archaea  normal  0.115192  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  31 
 
 
532 aa  97.4  5e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
522 aa  97.1  7e-19  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  32.77 
 
 
411 aa  96.7  1e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
532 aa  96.3  1e-18  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  28.14 
 
 
663 aa  96.7  1e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1146  methyl-accepting chemotaxis sensory transducer  27.69 
 
 
668 aa  96.7  1e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.970933  n/a   
 
 
-
 
NC_013923  Nmag_3638  methyl-accepting chemotaxis sensory transducer  29.25 
 
 
576 aa  96.7  1e-18  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4746  methyl-accepting chemotaxis sensory transducer  30.71 
 
 
503 aa  95.5  2e-18  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.000363987 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
499 aa  95.9  2e-18  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_011884  Cyan7425_1064  methyl-accepting chemotaxis sensory transducer with GAF sensor  29.15 
 
 
879 aa  95.5  2e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.698769  hitchhiker  0.00000570114 
 
 
-
 
NC_013440  Hoch_3254  methyl-accepting chemotaxis sensory transducer  27.24 
 
 
612 aa  95.5  2e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0159313  normal  0.0166963 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
601 aa  95.5  2e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_013922  Nmag_2884  methyl-accepting chemotaxis sensory transducer  29.96 
 
 
553 aa  95.9  2e-18  Natrialba magadii ATCC 43099  Archaea  normal  0.244033  n/a   
 
 
-
 
NC_012793  GWCH70_1221  methyl-accepting chemotaxis sensory transducer  27.05 
 
 
564 aa  95.1  3e-18  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000139892  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  36.08 
 
 
521 aa  95.1  3e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
637 aa  95.1  3e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  29.02 
 
 
498 aa  94.7  4e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0143  chemotaxis sensory transducer  30.65 
 
 
506 aa  94.4  4e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
662 aa  94.4  4e-18  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  29.46 
 
 
495 aa  94.4  4e-18  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
521 aa  94  6e-18  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  29.46 
 
 
495 aa  94  6e-18  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  30.08 
 
 
521 aa  94  6e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  29.28 
 
 
558 aa  94  6e-18  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  38.99 
 
 
521 aa  94  7e-18  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  31.61 
 
 
674 aa  94  7e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_2709  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
537 aa  93.6  7e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2710  methyl-accepting chemotaxis sensory transducer  30.63 
 
 
581 aa  93.6  7e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.196378 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
662 aa  93.6  8e-18  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2579  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.09 
 
 
678 aa  93.6  8e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  27.8 
 
 
661 aa  93.2  9e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_009439  Pmen_0782  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
676 aa  93.6  9e-18  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  33.5 
 
 
676 aa  93.2  9e-18  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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