33 homologs were found in PanDaTox collection
for query gene Mrub_3019 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  71.12 
 
 
561 aa  774    Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  100 
 
 
516 aa  1048    Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  39.9 
 
 
573 aa  300  5e-80  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  33.92 
 
 
506 aa  257  5e-67  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  32.95 
 
 
533 aa  217  5e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  34.78 
 
 
516 aa  193  7e-48  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  32.41 
 
 
525 aa  184  4.0000000000000006e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.33895 
 
 
-
 
NC_009523  RoseRS_0650  CRISPR-associated Cse1 family protein  29.67 
 
 
525 aa  141  1.9999999999999998e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  26.9 
 
 
517 aa  137  3.0000000000000003e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2573  CRISPR-associated Cse1 family protein  33.62 
 
 
560 aa  121  3.9999999999999996e-26  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00155149 
 
 
-
 
NC_013510  Tcur_2680  CRISPR-associated protein, Cse1 family  28.75 
 
 
561 aa  120  4.9999999999999996e-26  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00401114  n/a   
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  30.75 
 
 
567 aa  119  9.999999999999999e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1535  Cse1 family CRISPR-associated protein  29.01 
 
 
568 aa  114  4.0000000000000004e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  29.5 
 
 
540 aa  103  1e-20  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4093  CRISPR-associated protein, Cse1 family  25.53 
 
 
518 aa  102  2e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1600  CRISPR-associated Cse1 family protein  32.96 
 
 
555 aa  102  2e-20  Thermobifida fusca YX  Bacteria  normal  0.214237  n/a   
 
 
-
 
NC_013235  Namu_3054  CRISPR-associated protein, Cse1 family  28.1 
 
 
555 aa  97.1  8e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  0.044999  decreased coverage  0.000092711 
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  29.45 
 
 
550 aa  96.3  1e-18  Frankia sp. CcI3  Bacteria  normal  0.830051  normal 
 
 
-
 
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  27.19 
 
 
495 aa  94  5e-18  Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal 
 
 
-
 
NC_011729  PCC7424_2439  CRISPR-associated protein, Cse1 family  24.14 
 
 
525 aa  88.6  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007333  Tfu_1592  CRISPR-associated Cse1 family protein  28.4 
 
 
549 aa  88.2  3e-16  Thermobifida fusca YX  Bacteria  normal  0.440854  n/a   
 
 
-
 
NC_014210  Ndas_1281  CRISPR-associated protein, Cse1 family  30.21 
 
 
573 aa  84.3  0.000000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_17140  CRISPR-associated protein, Cse1 family  28.54 
 
 
525 aa  82.4  0.00000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3909  CRISPR-associated protein, Cse1 family  27.11 
 
 
1540 aa  77.8  0.0000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0587749  normal  0.0865606 
 
 
-
 
NC_009483  Gura_0827  CRISPR-associated Cse1 family protein  27.88 
 
 
545 aa  76.3  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  27.83 
 
 
722 aa  75.5  0.000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0923  CRISPR-associated protein, Cse1 family  26.73 
 
 
540 aa  75.9  0.000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0911  CRISPR-associated protein, Cse1 family  26.74 
 
 
507 aa  67.4  0.0000000005  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  25.9 
 
 
484 aa  67.4  0.0000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_013721  HMPREF0424_0760  CRISPR system CASCADE complex protein CasA  21.05 
 
 
556 aa  66.2  0.000000001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0334414 
 
 
-
 
NC_009457  VC0395_A2671  CRISPR-associated protein, Cse1 family  32.34 
 
 
507 aa  63.5  0.000000009  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2159  CRISPR-associated protein, Cse1 family  22.1 
 
 
529 aa  55.1  0.000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0719403  normal 
 
 
-
 
NC_002939  GSU1385  hypothetical protein  24.81 
 
 
506 aa  48.5  0.0003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
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