More than 300 homologs were found in PanDaTox collection
for query gene Mboo_0707 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_0707  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  100 
 
 
428 aa  846    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.172064 
 
 
-
 
NC_011832  Mpal_2121  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  71.03 
 
 
428 aa  601  1.0000000000000001e-171  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_0744  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  68.93 
 
 
429 aa  566  1e-160  Methanoculleus marisnigri JR1  Archaea  normal  0.225207  n/a   
 
 
-
 
NC_007796  Mhun_0647  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  63.55 
 
 
429 aa  556  1e-157  Methanospirillum hungatei JF-1  Archaea  normal  0.101947  normal  0.0867495 
 
 
-
 
NC_008942  Mlab_1453  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  60.75 
 
 
427 aa  522  1e-147  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.395706 
 
 
-
 
NC_008553  Mthe_0455  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  61.94 
 
 
428 aa  516  1.0000000000000001e-145  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1170  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  58.7 
 
 
413 aa  468  9.999999999999999e-131  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013926  Aboo_0457  Orotidine 5'-phosphate decarboxylase  53.07 
 
 
426 aa  443  1e-123  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0582  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  52.21 
 
 
437 aa  422  1e-117  Methanococcus vannielii SB  Archaea  normal  0.062003  n/a   
 
 
-
 
NC_009975  MmarC6_1403  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  51.28 
 
 
438 aa  417  9.999999999999999e-116  Methanococcus maripaludis C6  Archaea  normal  0.175956  n/a   
 
 
-
 
NC_009135  MmarC5_0321  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  51.05 
 
 
438 aa  416  9.999999999999999e-116  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0516  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  50.35 
 
 
438 aa  412  1e-114  Methanococcus maripaludis C7  Archaea  normal  0.35671  normal 
 
 
-
 
CP001800  Ssol_1184  Orotidine 5'-phosphate decarboxylase  40.2 
 
 
225 aa  142  1.9999999999999998e-32  Sulfolobus solfataricus 98/2  Archaea  normal  0.0998927  n/a   
 
 
-
 
NC_013526  Tter_2273  Orotidine 5'-phosphate decarboxylase  38.6 
 
 
240 aa  139  1e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3708  hexulose-6-phosphate synthase  38.54 
 
 
207 aa  138  1e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_0227  orotidine 5'-phosphate decarboxylase  40.85 
 
 
227 aa  136  6.0000000000000005e-31  Metallosphaera sedula DSM 5348  Archaea  normal  decreased coverage  0.0096121 
 
 
-
 
NC_002976  SERP0216  hexulose-6-phosphate synthase, putative  39.13 
 
 
210 aa  130  5.0000000000000004e-29  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009477  SaurJH9_2736  orotidine 5'-phosphate decarboxylase  38.65 
 
 
210 aa  129  1.0000000000000001e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009619  SaurJH1_2812  orotidine 5'-phosphate decarboxylase  38.65 
 
 
210 aa  129  1.0000000000000001e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3212  3-hexulose-6-phosphate synthase  38.35 
 
 
211 aa  127  5e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2929  3-hexulose-6-phosphate synthase  37.38 
 
 
211 aa  126  6e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.0000000015488 
 
 
-
 
NC_009487  SaurJH9_0593  orotidine 5'-phosphate decarboxylase  36.23 
 
 
210 aa  122  8e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0607  orotidine 5'-phosphate decarboxylase  36.23 
 
 
210 aa  122  8e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0823  Dimethylmenaquinone methyltransferase  36.32 
 
 
229 aa  122  9.999999999999999e-27  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007947  Mfla_0250  hexulose-6-phosphate synthase  36.6 
 
 
228 aa  122  9.999999999999999e-27  Methylobacillus flagellatus KT  Bacteria  unclonable  0.00000000013709  normal  0.0274377 
 
 
-
 
NC_007947  Mfla_1654  orotidine 5'-phosphate decarboxylase  38.3 
 
 
209 aa  119  7.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000168104  normal  0.271517 
 
 
-
 
NC_002977  MCA2738  hexulose-6-phosphate synthase/SIS domain-containing protein  35.38 
 
 
389 aa  119  9.999999999999999e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_1871  orotidine 5'-phosphate decarboxylase  39.81 
 
 
217 aa  117  5e-25  Caldivirga maquilingensis IC-167  Archaea  normal  0.563194  normal  0.356021 
 
 
-
 
NC_013517  Sterm_1849  3-hexulose-6-phosphate synthase  32.85 
 
 
212 aa  114  4.0000000000000004e-24  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_0708  orotidine 5'-phosphate decarboxylase  41.52 
 
 
222 aa  114  4.0000000000000004e-24  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.942951  normal 
 
 
-
 
NC_013132  Cpin_5671  Orotidine 5'-phosphate decarboxylase  38.32 
 
 
211 aa  109  9.000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.587401 
 
 
-
 
NC_009635  Maeo_1123  dimethylmenaquinone methyltransferase  34.55 
 
 
192 aa  108  1e-22  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_1085  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  36.84 
 
 
393 aa  107  3e-22  Methanoculleus marisnigri JR1  Archaea  normal  0.136979  n/a   
 
 
-
 
NC_007951  Bxe_A2429  putative dimethylmenaquinone methyltransferase  36.76 
 
 
235 aa  107  3e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.433884 
 
 
-
 
NC_003296  RS03175  putative transferase protein  34.22 
 
 
216 aa  105  1e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.191246 
 
 
-
 
NC_006369  lpl2610  DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein)  28.63 
 
 
615 aa  105  1e-21  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5004  Dimethylmenaquinone methyltransferase  39.66 
 
 
219 aa  105  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.205814  normal 
 
 
-
 
NC_002977  MCA3043  hexulose-6-phosphate synthase  33.01 
 
 
215 aa  105  2e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  0.146405  n/a   
 
 
-
 
NC_002977  MCA3049  hexulose-6-phosphate synthase  33.01 
 
 
215 aa  105  2e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8625  Dimethylmenaquinone methyltransferase  36.92 
 
 
236 aa  105  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.422142  n/a   
 
 
-
 
NC_007796  Mhun_1628  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  37.02 
 
 
393 aa  104  3e-21  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011769  DvMF_2302  Dimethylmenaquinone methyltransferase  34.87 
 
 
225 aa  103  7e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007355  Mbar_A0935  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  37.5 
 
 
392 aa  103  7e-21  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.0033619  normal 
 
 
-
 
NC_006368  lpp2737  DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein)  30.14 
 
 
615 aa  101  2e-20  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3330  Dimethylmenaquinone methyltransferase  39.43 
 
 
187 aa  101  3e-20  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00629512  hitchhiker  0.00927327 
 
 
-
 
NC_008701  Pisl_1686  orotidine 5'-phosphate decarboxylase  39.07 
 
 
221 aa  100  3e-20  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal  0.0279692 
 
 
-
 
NC_007955  Mbur_1994  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.38 
 
 
396 aa  100  6e-20  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_4023  Dimethylmenaquinone methyltransferase  38.17 
 
 
198 aa  100  7e-20  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0575059 
 
 
-
 
NC_009376  Pars_1830  orotidine 5'-phosphate decarboxylase  36.08 
 
 
221 aa  99.8  1e-19  Pyrobaculum arsenaticum DSM 13514  Archaea  hitchhiker  0.000143542  normal  0.0955115 
 
 
-
 
NC_009073  Pcal_0568  hexulose-6-phosphate synthase  40.71 
 
 
217 aa  99.4  1e-19  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_007492  Pfl01_2988  hypothetical protein  33.91 
 
 
212 aa  98.2  2e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_4017  dimethylmenaquinone methyltransferase  34.85 
 
 
222 aa  99  2e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.724559  n/a   
 
 
-
 
NC_003296  RS05389  hypothetical protein  40.67 
 
 
224 aa  98.2  3e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.969658 
 
 
-
 
NC_008942  Mlab_0996  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  32.27 
 
 
403 aa  97.8  3e-19  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.566431 
 
 
-
 
NC_010524  Lcho_0718  dimethylmenaquinone methyltransferase  38.07 
 
 
232 aa  98.2  3e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.287716 
 
 
-
 
NC_013205  Aaci_1611  hypothetical protein  35.8 
 
 
224 aa  97.4  4e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.642734  n/a   
 
 
-
 
NC_011883  Ddes_2380  Dimethylmenaquinone methyltransferase  35.75 
 
 
225 aa  97.4  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3204  hypothetical protein  33.49 
 
 
237 aa  97.1  5e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295684  n/a   
 
 
-
 
NC_011892  Mnod_8321  hypothetical protein  33.84 
 
 
224 aa  96.7  7e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.242879  n/a   
 
 
-
 
NC_010511  M446_5620  hypothetical protein  39.01 
 
 
224 aa  95.1  2e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.446281  normal 
 
 
-
 
NC_010505  Mrad2831_4138  hypothetical protein  33.84 
 
 
224 aa  95.5  2e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6359  hypothetical protein  33.82 
 
 
223 aa  95.5  2e-18  Variovorax paradoxus S110  Bacteria  normal  0.664548  n/a   
 
 
-
 
NC_009635  Maeo_0614  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  36.54 
 
 
391 aa  94.7  3e-18  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_0772  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.41 
 
 
393 aa  94.4  4e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.58783 
 
 
-
 
NC_007925  RPC_2726  dimethylmenaquinone methyltransferase  31.65 
 
 
233 aa  94  5e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.305233  normal  0.0255457 
 
 
-
 
NC_013923  Nmag_3877  Dimethylmenaquinone methyltransferase  34.38 
 
 
224 aa  93.6  6e-18  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013159  Svir_38400  4-carboxy-4-hydroxy-2-oxoadipate aldolase  32.31 
 
 
233 aa  93.2  9e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0889  Dimethylmenaquinone methyltransferase  35.38 
 
 
223 aa  92.4  1e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3078  hypothetical protein  37.13 
 
 
215 aa  92.4  1e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.177547  normal  0.0349255 
 
 
-
 
NC_008553  Mthe_0988  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.71 
 
 
392 aa  92.8  1e-17  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009512  Pput_1367  hypothetical protein  33.33 
 
 
212 aa  92  2e-17  Pseudomonas putida F1  Bacteria  normal  normal  0.797673 
 
 
-
 
NC_007005  Psyr_3070  dimethylmenaquinone methyltransferase  31.53 
 
 
239 aa  91.3  3e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2315  hypothetical protein  40 
 
 
222 aa  91.3  3e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.612121  normal 
 
 
-
 
NC_013093  Amir_4165  Dimethylmenaquinone methyltransferase  39.24 
 
 
196 aa  91.7  3e-17  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000000777049  n/a   
 
 
-
 
NC_009621  Smed_5904  dimethylmenaquinone methyltransferase  34.85 
 
 
237 aa  91.3  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.314397 
 
 
-
 
NC_010002  Daci_1382  dimethylmenaquinone methyltransferase  40.45 
 
 
231 aa  90.9  4e-17  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3165  hypothetical protein  34.27 
 
 
225 aa  90.9  4e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.25915  normal  0.552325 
 
 
-
 
NC_011981  Avi_7077  hypothetical protein  36.02 
 
 
224 aa  90.5  6e-17  Agrobacterium vitis S4  Bacteria  normal  0.373269  n/a   
 
 
-
 
NC_011887  Mnod_7816  Dimethylmenaquinone methyltransferase  30.88 
 
 
213 aa  90.1  7e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3937  3-keto-L-gulonate-6-phosphate decarboxylase  34.27 
 
 
218 aa  90.1  7e-17  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1036  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.27 
 
 
393 aa  89.7  8e-17  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011894  Mnod_6784  hypothetical protein  34.65 
 
 
213 aa  89.7  8e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3988  dimethylmenaquinone methyltransferase  40.33 
 
 
231 aa  89.7  9e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.34613  normal  0.0761518 
 
 
-
 
NC_010676  Bphyt_6118  hypothetical protein  39.38 
 
 
222 aa  89.4  1e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0095  Dimethylmenaquinone methyltransferase  37.95 
 
 
209 aa  89.4  1e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009511  Swit_3065  demethylmenaquinone methyltransferase-like protein  30.58 
 
 
222 aa  89  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.234171 
 
 
-
 
NC_012792  Vapar_6071  Dimethylmenaquinone methyltransferase  30.3 
 
 
209 aa  88.2  2e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3549  dimethylmenaquinone methyltransferase  36.47 
 
 
208 aa  88.6  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0526582 
 
 
-
 
NC_010505  Mrad2831_2119  hypothetical protein  30.87 
 
 
239 aa  88.6  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.270855 
 
 
-
 
NC_010002  Daci_4429  hypothetical protein  33.5 
 
 
224 aa  88.6  2e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.414912  normal  0.436944 
 
 
-
 
NC_012560  Avin_04570  Dimethylmenaquinone methyltransferase  31.58 
 
 
231 aa  87.8  3e-16  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2713  hypothetical protein  33.53 
 
 
225 aa  88.2  3e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013596  Sros_9411  demethylmenaquinone methyltransferase  36.17 
 
 
224 aa  87  5e-16  Streptosporangium roseum DSM 43021  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_5818  Dimethylmenaquinone methyltransferase  40 
 
 
205 aa  87.4  5e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.95078  normal 
 
 
-
 
NC_007348  Reut_B4782  dimethylmenaquinone methyltransferase  30.92 
 
 
220 aa  86.7  7e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.536032  n/a   
 
 
-
 
NC_012792  Vapar_5742  4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase  34.25 
 
 
235 aa  85.9  0.000000000000001  Variovorax paradoxus S110  Bacteria  normal  0.228064  n/a   
 
 
-
 
NC_007005  Psyr_2595  dimethylmenaquinone methyltransferase  33.94 
 
 
214 aa  85.9  0.000000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.233202  normal  0.0150899 
 
 
-
 
NC_009511  Swit_0479  dimethylmenaquinone methyltransferase  30.26 
 
 
234 aa  85.5  0.000000000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.145449  normal 
 
 
-
 
NC_009426  Saro_4018  dimethylmenaquinone methyltransferase  34.42 
 
 
232 aa  85.5  0.000000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4121  hypothetical protein  35.06 
 
 
237 aa  85.5  0.000000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
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