Gene Mboo_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0707 
Symbol 
ID5411609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp670753 
End bp672039 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content56% 
IMG OID640867927 
Productbifunctional hexulose-6-phosphate synthase/ribonuclease regulator 
Protein accessionYP_001403868 
Protein GI154150250 
COG category[G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins
[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR03128] 3-hexulose-6-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.172064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TTGTCCTGCA GGTTGCGCTG GACCTCCTTG AGCTTAACCG GGCCGTACAG 
ATTGCACGGG AGGCGCTGAC CGGTGGAGCT GACTGGATCG AGGCCGGGAC CCCGCTTATC
AAAAGCGAGG GAATGCGGGC GATCCGTACG TTGCGTGAGC AGTTCCCGGA TGCTGTCATC
GTTGCTGACA TGAAAGTCGC TGATACCGGT ACTCTCGAAG TCGAGATGGC CGCAAAAGCC
GGGGCAAACA TTGTCTGCAT CCTTGCTGAC GCGGACGATG CAGTGATTGC CGAAGCAGTA
CGGGCCGGCC GATTGTATGG AGTCAAGCTG ATGGCGGATC TTATCAATGT TGAGGATCCG
GTGGGGCGTG CCCGACAACT TGAGACGCTG GGGGTGGATA TCATTGCAGC ACATGTTGGC
ATCGATCAGC AGATGATAGG GAAGGATTCT CTAGATCTTC TCCAGATGAT AAGGAAAGAG
ATCCATATCC CGGTTGCCGT TGCAGGAGGG TTGGATCCTG TCACCTCCGG GGAGGCAGCA
AATATTGGCG CCGATATCGT GATTGTCGGT GGTTGGATCG CCCGCTCTGC CGATGTCGAG
GGATCTGCCC GTCAGATCCG GACATCTTTG GATTCACCCA CCCCTGCAGC CCCGGAAAAA
AAGAGCAGGG ACGAAGAGAT CCGATCGCTC CTGATTCAGG TCTCCACTCC CAATATCAGT
GATGCAATGC ACCGGAAAGG TGCGCTCCCT GGCTTGGTTT CACTTTGCGG AAATGTAAAG
ATGGCCGGCA GGGCTGTCAC TGTGTGGACG ATAGCCGGTG ACTGGGCTAA ACCAGTGGAG
GCTATCGATG GTGCAGCCCC GGGAAGCGTT CTTGTCATTA ACAACGATGG AGGAGTCCAT
GTAGCTCCAT GGGGAGAACT TGCTACATTG AGCTGCCTCC AGCGGGGCAT CGCAGGTGTC
GTGATTGATG GTGCGGCCCG TGATATTGAT GATATACGGG CTATGAAATT TCCTCTCTTT
GCACGTGCTG TCGTACCCAA TGCCGGTGAA CCCAAAGGGT ATGGCGAAAT TAATACGGAG
ATCCAGTGCT GCGGGCAGTC TGTCCGGCCT GGTGACTGGA TTGTTGGGGA CGAGAGCGGC
GTTGTGGCAA TTCCCGGTGA ACGGGGATAC GAAGTGGCAC GACGGGCGCT TGAAGTCAAA
AAGACTGAGG CGAGGATACG CGAGGAGATC CGCCGGGGAA GTACGCTCTC CACCGTTGCA
GATCTGATAA AATGGGAGAA AAAATGA
 
Protein sequence
MEKIVLQVAL DLLELNRAVQ IAREALTGGA DWIEAGTPLI KSEGMRAIRT LREQFPDAVI 
VADMKVADTG TLEVEMAAKA GANIVCILAD ADDAVIAEAV RAGRLYGVKL MADLINVEDP
VGRARQLETL GVDIIAAHVG IDQQMIGKDS LDLLQMIRKE IHIPVAVAGG LDPVTSGEAA
NIGADIVIVG GWIARSADVE GSARQIRTSL DSPTPAAPEK KSRDEEIRSL LIQVSTPNIS
DAMHRKGALP GLVSLCGNVK MAGRAVTVWT IAGDWAKPVE AIDGAAPGSV LVINNDGGVH
VAPWGELATL SCLQRGIAGV VIDGAARDID DIRAMKFPLF ARAVVPNAGE PKGYGEINTE
IQCCGQSVRP GDWIVGDESG VVAIPGERGY EVARRALEVK KTEARIREEI RRGSTLSTVA
DLIKWEKK