Gene Pput_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1367 
Symbol 
ID5191080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1536247 
End bp1536885 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID640585832 
Producthypothetical protein 
Protein accessionYP_001266709 
Protein GI148546607 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.797673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCA ATGTGTCCGA TGAGTCGATC AGTGTAAACG CCACTTGGGA GCGAGCTGAC 
CTGGCGTTGA TCGAGGAAAT CTCGCATTAC CCAGTGGCAC TCATCGGCGA CGTACTCAAC
CGCATGGGCA TGATGGCGTC GGCCATTCGC CACACCGCTG GCAAGCCTGC ATTCTTCGGC
ACCATCTTGC CGCTGAACAC TCGCGAGGGT GACAACCTTG CTATCCACCG TGCGTTGGAC
GAAGCCCAGC CAGGAGATGT GCTGGTCATC AACGGCAACG GTGAAGTGAA CCGCTCAGTG
TTCGGTGATC TGCTCGGGGA GATTTGCCTA GCCAAGCAGG TTGCAGCGGT CGTCATTGAC
GGCGCGGTGC GTGACATTGA AGAGCTCGAC AGCATGGGGC TGCCTATCTA TGCCCGCGCG
GTGAACCCAG CCGGCCCCTC GAAATGGGGC CCAGGCCAGG TAGGCGTTCC AATCGCCTGC
GGCAACGTCG TTTGCTACCC AGGCGATGCC ATTATCGGTG ACCGCGACGG CATCATCGTG
GTTGCTCGCA GCCTGCTGCC GACCTTGGCT GAGAAGGTGA AACTCCAGGA CGGCTACGAG
AACAACTTCC GCGAGAAAGT ACGGGCAAGC GTGCGTTAA
 
Protein sequence
MFINVSDESI SVNATWERAD LALIEEISHY PVALIGDVLN RMGMMASAIR HTAGKPAFFG 
TILPLNTREG DNLAIHRALD EAQPGDVLVI NGNGEVNRSV FGDLLGEICL AKQVAAVVID
GAVRDIEELD SMGLPIYARA VNPAGPSKWG PGQVGVPIAC GNVVCYPGDA IIGDRDGIIV
VARSLLPTLA EKVKLQDGYE NNFREKVRAS VR