Gene Mbar_A1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1170 
Symbol 
ID3624732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1436305 
End bp1437546 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content47% 
IMG OID637700061 
Productbifunctional hexulose-6-phosphate synthase/ribonuclease regulator 
Protein accessionYP_304718 
Protein GI73668703 
COG category[G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins
[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR03128] 3-hexulose-6-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATCGTG CGGTAGAGAT TGCAAAAGAG GCAATAGCAG GGGGTGCGGA CTGGATAGAA 
ATTGGAACCC CTCTGATCAA AAGTGAGGGG ATGGACGCAA TCCGCACCAT GAGGAAAGCT
TTTCCAGATC GGACGATTCT GGCAGACATG AAAACTGTAG ATACAGGCGC TATAGAAGTC
GAGATGGCAG CAAAAGCTGG AGCTGATGTT GTTATTGTGC TAGGGAGTGC AGATGATTCT
ACATTACTTG ACGCACTCCG TTCATCCCAC AAATATGGAG TCAGGTTAAT GGCAGACCTA
ATTTCGGCTC CTGATCCTGT AAAGAGGGTC GTTGAACTTG AGGCTCTGGG CGTGGACTAT
GTTAATGTAC ACATAGGAAT AGACCAGCAG ATGATGGGAA AAGATCCCAT AGCACTTCTC
AGGGAAATTT CACAGAGAGT CAACGTACAG CTTGCAGTCG CTGGTGGGCT TGATGCAAAT
AGTGCAGTGC AGGCTGTCAA AGCTGGAGCA AAGGTCGTAA TTGTTGGAGG GAATATCACC
CATTCTGACA ACGTAACCGA AGCCGCCAGA AAAATCCGGC AGAGTGTGGA CTCCCCAGAC
GCTGTAGAAA TCTGCAGTGT CAGCACTGTA GACCAGGAAA TCAGAGAAAT TCTTAAGGAA
GTATCCACTT CAAATATTTC TGATGCCATG CACCGGAAAG GTGCAATGAA AGGCATTCAC
CCTCTGGTAA GAGGAAAAAT GGTAGGAACC GCAGTTACCG TGCAGACTTT TCCTGGAGAC
TGGGCAAAGC CCGTGGAAGC AATTGATATT GCAAAAGAAG GAGACGTAAT CGTTATTTAC
AACGAAAATA AGGATGTTGC CTGTTGGGGA GGGCTTGCAA CCTGGAGCGC CTTGAACAAG
GGAATTGCAG GTTTGGTAAT AGAAGGCGCT GTCAGAGATA TTGACGAAGT CGAAACCCTG
GGACTTCCGA TTTATACGAG CAATACCGTA CCTAACGCCG GAGATCCTAA AGGTTTTGGA
GAAATCAATG CTGAAATTAC CTGTGGTGGT CAGGCCGTGA AGCCAGGAGA TTATATAGTG
GGCGATGAAA GCGGTGTTGT GGTAATTCCA GCAGAGAGAG CATACGAGCT GGCAAGAAGA
GCAAAAGAAG TTTACAAAAC CGAAAAAAGA CTCTTCGATG AAATCAAGAG AGGCGGGACA
CTGTCTGAGA TTATGGATCT GAAGAAGTGG GAAAAACATT GA
 
Protein sequence
MDRAVEIAKE AIAGGADWIE IGTPLIKSEG MDAIRTMRKA FPDRTILADM KTVDTGAIEV 
EMAAKAGADV VIVLGSADDS TLLDALRSSH KYGVRLMADL ISAPDPVKRV VELEALGVDY
VNVHIGIDQQ MMGKDPIALL REISQRVNVQ LAVAGGLDAN SAVQAVKAGA KVVIVGGNIT
HSDNVTEAAR KIRQSVDSPD AVEICSVSTV DQEIREILKE VSTSNISDAM HRKGAMKGIH
PLVRGKMVGT AVTVQTFPGD WAKPVEAIDI AKEGDVIVIY NENKDVACWG GLATWSALNK
GIAGLVIEGA VRDIDEVETL GLPIYTSNTV PNAGDPKGFG EINAEITCGG QAVKPGDYIV
GDESGVVVIP AERAYELARR AKEVYKTEKR LFDEIKRGGT LSEIMDLKKW EKH