Gene Slin_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4023 
Symbol 
ID8727781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4833162 
End bp4833758 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content56% 
IMG OID 
ProductDimethylmenaquinone methyltransferase 
Protein accessionYP_003388812 
Protein GI284038882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0575059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATC AACTCGCACA ATTCTCTACC GCCACCCTGC ACGAAGCACT CGGCAAAGCA 
GGCAACTTAC CCTCGGCCAT CAAACCGATC GCGCCCGGCA TGAAGATATG TGGCCCGGCC
TACACAGTGC AGACGATACC GGGCGACAAT AAACTACTGC ATCGGGCCTA CGCCTACGCA
CAGCCGGGTG ATGTACTTGT AGCGCACTGC TCCGACTATT ACGAAGCGGG CTACTGGGGC
GATTTAATGA GTCTGGGTGC CAAAACAAAA GGCCTCGCCG GGTTGGTCAT CGACGCCTGT
GTCCGCGATG CCGACGACAT CGAAGCGATG GGTTTTCCGG TGTTCAGCCG GGGGCTGTGC
ATCAAGGGTA CGTCGAGTAT CGAAGGCGGC CGATTGAACG AGCCCGTCGT TATTGGTGGC
GTTGTGGTTC ATCCCGGCGA CATCATTGTG GGTGACCGCG ATGGCGTTGT TGTGGTACCG
AAAAACCGCG TCCAGGAGGT AGTTGAAAAG GCGACCGCCC GCGAAACCCG CGAAGAATCC
ATCCGCGAAC AACTCCGACA AGGCAAAACA TCTATTCAAA TTTATGGGTG GGAATAA
 
Protein sequence
MNHQLAQFST ATLHEALGKA GNLPSAIKPI APGMKICGPA YTVQTIPGDN KLLHRAYAYA 
QPGDVLVAHC SDYYEAGYWG DLMSLGAKTK GLAGLVIDAC VRDADDIEAM GFPVFSRGLC
IKGTSSIEGG RLNEPVVIGG VVVHPGDIIV GDRDGVVVVP KNRVQEVVEK ATARETREES
IREQLRQGKT SIQIYGWE