Gene PSPTO_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3204 
Symbol 
ID1184861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3597525 
End bp3598238 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content58% 
IMG OID637394558 
Producthypothetical protein 
Protein accessionNP_792992 
Protein GI28870373 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.295684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTGC CCTTTGAATA CACGCCTATC GCGCAGAGCG TGCTCGATGA ATGCGAGCAT 
CTGGACACGG CATCGTTGTC TGACGCACTG GACAGCCTTG GCATCGACGG CGGACTGCCG
GGCATTGCTT CGCAAGTACC GGGCACACGC TGCGTCGGTA TCGCCTTCAC GGTGCAGTAC
CAACCGGTTG ATGCGTCAGA AGGGTTCAGA GGGGCTGCCA ATTATATTGA TCAAGTGCCG
AGCGGTTCTG TGATTGTCTC TTCGAATTCG GGACGTCATG ACTGCACGGT GTGGGGTGAC
ATCATGACCC ACTTTGCCTT GGCCAACGGC ATCAAAGGCA CGGTTATAGA TGGCGTTGCA
CGTGATATCG ATACCGTTAT CAACTGCAAC TACCCGTTGT TCAGTCGCGG ACGTTTCATG
CAGTCGGCGA AGAACCGTAC ACAACTCAAG GCCGTCCAGG TGCCGCTCGT TATAGATGGC
ATCACCATTC AGCCGGGAGA CCTGATGGTG TGTGACGGCA GCGGCTGTGT TGTGGTCCCG
CAGCAACTGG CGGCCGAAGT GGTGCTGCGT GCCAGGGCCG TAGAGCAGAC CGAGCGCCGT
ATCATCGAAG CCATATCCTC CGGTTCGACA CTTGAGCAGG CGCGAATGAC ATACCGCTAC
GACCAGCCCT GGTTGAGCGA GGCTGAACAC GGTGGTACGC AAGTGCCGTC GTAG
 
Protein sequence
MSVPFEYTPI AQSVLDECEH LDTASLSDAL DSLGIDGGLP GIASQVPGTR CVGIAFTVQY 
QPVDASEGFR GAANYIDQVP SGSVIVSSNS GRHDCTVWGD IMTHFALANG IKGTVIDGVA
RDIDTVINCN YPLFSRGRFM QSAKNRTQLK AVQVPLVIDG ITIQPGDLMV CDGSGCVVVP
QQLAAEVVLR ARAVEQTERR IIEAISSGST LEQARMTYRY DQPWLSEAEH GGTQVPS