Gene Daci_4429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4429 
Symbol 
ID5750017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4850903 
End bp4851577 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID641299531 
Producthypothetical protein 
Protein accessionYP_001565444 
Protein GI160899862 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.414912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.436944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTC TTCAAATTCT GAAGCGGCAA CGCGCTGTCA GCCTTGATAT TGCCAGGCGC 
TATCTCGACG TGCCTGTTGC CAACGTCAGC GACTGCATGG CCCGCATGAC GGCGGGCGGC
GCGCGGTTGC GCCCCATGCA CGGCGGCGGG CGCATGGCCG GCCCCGCGCT GACCATCAAG
ACACGCCCGG GCGACAACCT CATGCTCCAC AAGGCACTTC AACTGGCCAG CCCAGGTGAC
GTGATCGTGG TGGATGCGGG GGGCGACCTC ACCAACGCAC TCATCGGAGA AATCATGGTC
GGAGACGCCA TGCGTCGCCA GCTGGGCGGC GTCGTGATCA ACGGCGCGAT CCGGGACGCG
GCATGGATTC GTGCTGGCAG CTTCCCGGTA TTCGCAGCGG GCGTCACGCA CCGCGGACCC
TACAAGGACG GCCCTGGCGA AATCAATGTG CCCATCGCCA TCGATGGCAT GGTGATCGAG
CCCGGTGACC TCATGATTGG CGACGACGAT GGCTTGCTGT GCGTACCGTA TGCGCAGGCG
CAGGCCTTGC TGGATGCAGC ACTCGGGAAG CAGGTCGTTG AGGCCAGGAT GGTGGCCGAC
ATCGCTGCCG GTACCTACAG CGCGCCATGG ATAGACGAGA CGCTCAAGCG TCTGGGGTGT
CCGATTCAGC CGTAG
 
Protein sequence
MIGLQILKRQ RAVSLDIARR YLDVPVANVS DCMARMTAGG ARLRPMHGGG RMAGPALTIK 
TRPGDNLMLH KALQLASPGD VIVVDAGGDL TNALIGEIMV GDAMRRQLGG VVINGAIRDA
AWIRAGSFPV FAAGVTHRGP YKDGPGEINV PIAIDGMVIE PGDLMIGDDD GLLCVPYAQA
QALLDAALGK QVVEARMVAD IAAGTYSAPW IDETLKRLGC PIQP