Gene Pcal_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0568 
Symbol 
ID4908157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp539217 
End bp539870 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID640124316 
Producthexulose-6-phosphate synthase 
Protein accessionYP_001055461 
Protein GI126459183 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins 
TIGRFAM ID[TIGR03128] 3-hexulose-6-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTAC AAGTTGCGCT AGACCTCGTA GATTTGAGGA AGGCAATTGC CCTAACCCGA 
GACTTGTGCG AAGTAGGGCT TGAGATAGTG GAGGCAGGCA CCCCGCTAAT AAAAATGTAC 
GGCCTCCCAG TAGTTGGCGC ATTAAAAGCC GCTTGCCCAC GCGCCGAGGT TGTAGCCGAT 
TTAAAGACCG CCGACGTAGG CGCGCTTGAA GCTAGTCTAG CCAGGGAGTT TGGCGCAGAC 
TGGGCCACGG TCCTTGGGGC AACAAACATG GAGACAATAG AGGAGTTTGT AAGAGAGGGC 
AAGAGAATTG GGCTCAAAAC GGCCGTGGAC TTAATAGGCG TGGCAAACCC CGTGGAGAGA 
GCAAAGGAGA TACTCAGAGT GGCGACACCC GACCTTTTCG TTTTCCACCT AGGCATAGAC 
GTGCAAAAGA GAGCTGGGCT AAGATTTGAG GAACTCCTAG ACCTCGCGTA CAGGGTGAAG 
GAGGGCGGCG TGGGGGTAGG CATCGCAGGA GGGTTGACTG AAAAAGAGAT AGAGTATGTG 
GTAAAGAGCG GGAAGTCCAT AGACATAATT ATAGTAGGAA GAGCAGTAAC ACAAGCAGAT 
TCGCCTAAGA CAAAATTTAT GACAATTAAT AATATTTTAA AATCTAAGAG TTAA
 
Protein sequence
MKLQVALDLV DLRKAIALTR DLCEVGLEIV EAGTPLIKMY GLPVVGALKA ACPRAEVVAD 
LKTADVGALE ASLAREFGAD WATVLGATNM ETIEEFVREG KRIGLKTAVD LIGVANPVER 
AKEILRVATP DLFVFHLGID VQKRAGLRFE ELLDLAYRVK EGGVGVGIAG GLTEKEIEYV 
VKSGKSIDII IVGRAVTQAD SPKTKFMTIN NILKSKS