| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1871 |
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| Symbol | |
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| ID | 5709743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1945197 |
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| End bp | 1945850 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641276378 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001541678 |
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| Protein GI | 159042426 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0269] 3-hexulose-6-phosphate synthase and related proteins |
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| TIGRFAM ID | [TIGR03128] 3-hexulose-6-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.563194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.356021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTAC AGGTGGCATT GGATTTAACA AACCTAGATG CTGCCGTTGA CTTGGCTAGG
AGACTTCATA GGGGTGGGTT GATTGATGTT ATTGAGGTTG GTACACCATT AATAAAGGCC
TACGGCATGT ATGCTGTATC AAGAATGAGG GTCTGCTGCC CCTCGGCGCT AATATTCGCC
GACTTAAAGA CAATGGACGC TGGTAGAATT GAGGTGAGGT TAGCCTCAGA GAATGGTGCA
AACATGGCCA GTGTATTGGC CGCTGCCCCA GTGGATACTA TAAGGGAATT CAGTGATGAG
GCCAGGAAAC TGGGCTTAAG CACCGTGGTT GACTTCATAG GGGTGGTTAA CGTTGAGGAG
AGGGTTAAGG AGGTTCTTAA TGCAGCTAAG GTTGATTACA TAGGCCTCCA CGTGGGTATT
GACGTACAGG ACTCTAGGAA AGTTAACGCT GAGGTACTTA TCGATGAAGC CGAGTCAATA
AAGAGGAAGT ATAATGTTGG GGTTACCCTG GCAGGTGGTG TTGACGCTGG AACAGCCCTT
AAATTAAGGG GAAGGGACAT TGATATAGTT GTAGTTGGTA GAGCCATAAC CTCAGCTGAG
AAGCCGGAGG GTGTGGCTAG GGAAATTAGA AGAAACCTAG GACTAATGCA GTGA
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| Protein sequence | MKLQVALDLT NLDAAVDLAR RLHRGGLIDV IEVGTPLIKA YGMYAVSRMR VCCPSALIFA
DLKTMDAGRI EVRLASENGA NMASVLAAAP VDTIREFSDE ARKLGLSTVV DFIGVVNVEE
RVKEVLNAAK VDYIGLHVGI DVQDSRKVNA EVLIDEAESI KRKYNVGVTL AGGVDAGTAL
KLRGRDIDIV VVGRAITSAE KPEGVAREIR RNLGLMQ
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