135 homologs were found in PanDaTox collection
for query gene Mlab_0996 on replicon NC_008942
Organism: Methanocorpusculum labreanum Z



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008942  Mlab_0996  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  100 
 
 
403 aa  817    Methanocorpusculum labreanum Z  Archaea  normal  normal  0.566431 
 
 
-
 
NC_009712  Mboo_0772  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  67 
 
 
393 aa  540  9.999999999999999e-153  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.58783 
 
 
-
 
NC_009051  Memar_1085  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  66.75 
 
 
393 aa  536  1e-151  Methanoculleus marisnigri JR1  Archaea  normal  0.136979  n/a   
 
 
-
 
NC_011832  Mpal_1036  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  66.75 
 
 
393 aa  534  1e-150  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1628  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  64.02 
 
 
393 aa  524  1e-147  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_1994  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  60.3 
 
 
396 aa  499  1e-140  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0935  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  60.79 
 
 
392 aa  488  1e-136  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.0033619  normal 
 
 
-
 
NC_008553  Mthe_0988  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  59.31 
 
 
392 aa  471  1.0000000000000001e-131  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0614  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  37.38 
 
 
391 aa  242  1e-62  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_014148  Plim_1285  formaldehyde-activating enzyme  50.92 
 
 
165 aa  165  1.0000000000000001e-39  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2060  formaldehyde-activating enzyme  49.68 
 
 
178 aa  159  8e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.189028  normal  0.41416 
 
 
-
 
NC_007955  Mbur_0367  formaldehyde-activating enzyme  46.5 
 
 
160 aa  153  5.9999999999999996e-36  Methanococcoides burtonii DSM 6242  Archaea  normal  0.203725  n/a   
 
 
-
 
NC_010505  Mrad2831_0533  formaldehyde-activating enzyme  43.59 
 
 
170 aa  136  7.000000000000001e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2390  formaldehyde-activating enzyme  44.3 
 
 
175 aa  135  9.999999999999999e-31  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_1785  formaldehyde-activating enzyme  42.95 
 
 
170 aa  135  1.9999999999999998e-30  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2436  formaldehyde-activating protein  45.86 
 
 
169 aa  134  3e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.397979 
 
 
-
 
NC_012791  Vapar_3079  formaldehyde-activating enzyme  44.94 
 
 
170 aa  133  6e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6487  formaldehyde-activating enzyme  43.95 
 
 
169 aa  132  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  0.497311  normal  0.302319 
 
 
-
 
NC_010172  Mext_1834  formaldehyde-activating enzyme  41.67 
 
 
170 aa  130  5.0000000000000004e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2169  formaldehyde-activating enzyme  41.67 
 
 
170 aa  130  5.0000000000000004e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.783809  normal  0.178175 
 
 
-
 
NC_008825  Mpe_A2612  formaldehyde-activating enzyme  43.04 
 
 
169 aa  130  6e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.0416881  normal 
 
 
-
 
NC_002977  MCA2866  formaldehyde-activating enzyme  43.67 
 
 
170 aa  129  7.000000000000001e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6007  formaldehyde-activating enzyme  41.4 
 
 
171 aa  129  8.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.100814  n/a   
 
 
-
 
NC_010511  M446_5783  formaldehyde-activating enzyme  42.04 
 
 
171 aa  129  1.0000000000000001e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.0971644  normal 
 
 
-
 
NC_009720  Xaut_0032  formaldehyde-activating protein  42.04 
 
 
169 aa  127  4.0000000000000003e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.848098 
 
 
-
 
NC_009720  Xaut_1365  formaldehyde-activating protein  42.41 
 
 
191 aa  126  8.000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  0.745489  normal 
 
 
-
 
NC_009051  Memar_0975  formaldehyde-activating enzyme  47.13 
 
 
167 aa  125  1e-27  Methanoculleus marisnigri JR1  Archaea  normal  0.0927434  n/a   
 
 
-
 
NC_010524  Lcho_3147  formaldehyde-activating enzyme  42.41 
 
 
169 aa  125  2e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008553  Mthe_0455  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  34.84 
 
 
428 aa  115  1.0000000000000001e-24  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0647  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  34.51 
 
 
429 aa  108  2e-22  Methanospirillum hungatei JF-1  Archaea  normal  0.101947  normal  0.0867495 
 
 
-
 
NC_013926  Aboo_0457  Orotidine 5'-phosphate decarboxylase  33.94 
 
 
426 aa  106  7e-22  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007947  Mfla_1652  formaldehyde-activating enzyme  37.35 
 
 
178 aa  105  1e-21  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000163018  normal  0.176505 
 
 
-
 
NC_007947  Mfla_2543  formaldehyde-activating enzyme  38.55 
 
 
178 aa  105  1e-21  Methylobacillus flagellatus KT  Bacteria  normal  0.234356  normal 
 
 
-
 
NC_002977  MCA3043  hexulose-6-phosphate synthase  30.73 
 
 
215 aa  103  4e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  0.146405  n/a   
 
 
-
 
NC_002977  MCA3049  hexulose-6-phosphate synthase  30.73 
 
 
215 aa  103  4e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0321  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  31.44 
 
 
438 aa  104  4e-21  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0516  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  31.44 
 
 
438 aa  103  4e-21  Methanococcus maripaludis C7  Archaea  normal  0.35671  normal 
 
 
-
 
CP001800  Ssol_1184  Orotidine 5'-phosphate decarboxylase  29.41 
 
 
225 aa  103  6e-21  Sulfolobus solfataricus 98/2  Archaea  normal  0.0998927  n/a   
 
 
-
 
NC_002977  MCA2738  hexulose-6-phosphate synthase/SIS domain-containing protein  31.05 
 
 
389 aa  103  6e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1403  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  32.31 
 
 
438 aa  102  2e-20  Methanococcus maripaludis C6  Archaea  normal  0.175956  n/a   
 
 
-
 
NC_007511  Bcep18194_B2825  hypothetical protein  33.11 
 
 
174 aa  100  3e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0744  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  30.18 
 
 
429 aa  100  3e-20  Methanoculleus marisnigri JR1  Archaea  normal  0.225207  n/a   
 
 
-
 
NC_010676  Bphyt_6933  formaldehyde-activating enzyme  33.33 
 
 
190 aa  100  4e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.587797  normal 
 
 
-
 
NC_012791  Vapar_3063  formaldehyde-activating enzyme  38.36 
 
 
177 aa  99  1e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0582  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  32.16 
 
 
437 aa  98.2  2e-19  Methanococcus vannielii SB  Archaea  normal  0.062003  n/a   
 
 
-
 
NC_007947  Mfla_0250  hexulose-6-phosphate synthase  32.84 
 
 
228 aa  97.8  3e-19  Methylobacillus flagellatus KT  Bacteria  unclonable  0.00000000013709  normal  0.0274377 
 
 
-
 
NC_009712  Mboo_0707  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  32.27 
 
 
428 aa  97.8  3e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.172064 
 
 
-
 
NC_009954  Cmaq_1871  orotidine 5'-phosphate decarboxylase  31.82 
 
 
217 aa  97.8  3e-19  Caldivirga maquilingensis IC-167  Archaea  normal  0.563194  normal  0.356021 
 
 
-
 
NC_007355  Mbar_A1170  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  32.63 
 
 
413 aa  97.4  4e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010623  Bphy_5474  formaldehyde-activating enzyme  36.3 
 
 
177 aa  96.7  7e-19  Burkholderia phymatum STM815  Bacteria  normal  0.0338658  normal  0.0655052 
 
 
-
 
NC_008942  Mlab_1453  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  29.82 
 
 
427 aa  94.7  2e-18  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.395706 
 
 
-
 
NC_011832  Mpal_2121  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  30.18 
 
 
428 aa  94.7  2e-18  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010524  Lcho_3132  formaldehyde-activating enzyme  39.76 
 
 
181 aa  94.7  3e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A2627  putative formaldehyde-activating enzyme  37.95 
 
 
177 aa  94  4e-18  Methylibium petroleiphilum PM1  Bacteria  normal  0.212894  normal 
 
 
-
 
NC_010525  Tneu_0708  orotidine 5'-phosphate decarboxylase  30.24 
 
 
222 aa  93.6  6e-18  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.942951  normal 
 
 
-
 
NC_008698  Tpen_0372  orotidine 5'-phosphate decarboxylase  32.74 
 
 
231 aa  92.8  1e-17  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_009073  Pcal_0568  hexulose-6-phosphate synthase  31.34 
 
 
217 aa  91.7  2e-17  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009376  Pars_1830  orotidine 5'-phosphate decarboxylase  30.81 
 
 
221 aa  91.7  2e-17  Pyrobaculum arsenaticum DSM 13514  Archaea  hitchhiker  0.000143542  normal  0.0955115 
 
 
-
 
NC_007947  Mfla_2524  putative formaldehyde-activating enzyme  32.94 
 
 
183 aa  90.1  5e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3708  hexulose-6-phosphate synthase  30.58 
 
 
207 aa  90.1  7e-17  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1654  orotidine 5'-phosphate decarboxylase  31.82 
 
 
209 aa  89.4  1e-16  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000168104  normal  0.271517 
 
 
-
 
NC_009832  Spro_2468  formaldehyde-activating protein  32.21 
 
 
167 aa  88.6  2e-16  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2929  3-hexulose-6-phosphate synthase  31.37 
 
 
211 aa  86.7  7e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.0000000015488 
 
 
-
 
NC_008701  Pisl_1686  orotidine 5'-phosphate decarboxylase  41.07 
 
 
221 aa  85.9  0.000000000000001  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal  0.0279692 
 
 
-
 
NC_009477  SaurJH9_2736  orotidine 5'-phosphate decarboxylase  28.91 
 
 
210 aa  84  0.000000000000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009619  SaurJH1_2812  orotidine 5'-phosphate decarboxylase  28.91 
 
 
210 aa  84  0.000000000000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0216  hexulose-6-phosphate synthase, putative  28.44 
 
 
210 aa  81.6  0.00000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1542  hypothetical protein  37.32 
 
 
167 aa  82  0.00000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1651  formaldehyde-activating enzyme  37.32 
 
 
167 aa  82  0.00000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2016  formaldehyde-activating enzyme  34.73 
 
 
179 aa  81.6  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.560353  normal  0.585828 
 
 
-
 
NC_009487  SaurJH9_0593  orotidine 5'-phosphate decarboxylase  29.38 
 
 
210 aa  81.3  0.00000000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0607  orotidine 5'-phosphate decarboxylase  29.38 
 
 
210 aa  81.3  0.00000000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1721  hypothetical protein  37.32 
 
 
167 aa  81.3  0.00000000000003  Yersinia pestis Angola  Bacteria  normal  0.054067  hitchhiker  0.00446803 
 
 
-
 
NC_010511  M446_4369  formaldehyde-activating enzyme  32.74 
 
 
181 aa  81.3  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.279882  normal 
 
 
-
 
NC_013132  Cpin_5671  Orotidine 5'-phosphate decarboxylase  34.95 
 
 
211 aa  80.5  0.00000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.587401 
 
 
-
 
NC_009720  Xaut_1627  formaldehyde-activating protein  33.73 
 
 
179 aa  79.3  0.0000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.67854  normal 
 
 
-
 
NC_011666  Msil_1799  formaldehyde-activating enzyme  34.69 
 
 
178 aa  79  0.0000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_4915  formaldehyde-activating enzyme  32.88 
 
 
181 aa  79  0.0000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.090523  n/a   
 
 
-
 
NC_007947  Mfla_2364  putative formaldehyde-activating enzyme  28.22 
 
 
182 aa  78.2  0.0000000000002  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000000204771  normal  0.719365 
 
 
-
 
NC_009440  Msed_0227  orotidine 5'-phosphate decarboxylase  28.26 
 
 
227 aa  77.8  0.0000000000003  Metallosphaera sedula DSM 5348  Archaea  normal  decreased coverage  0.0096121 
 
 
-
 
NC_010725  Mpop_1445  formaldehyde-activating enzyme  32.19 
 
 
179 aa  77.4  0.0000000000004  Methylobacterium populi BJ001  Bacteria  normal  normal  0.318243 
 
 
-
 
NC_011757  Mchl_1725  formaldehyde-activating enzyme  30.82 
 
 
179 aa  77.4  0.0000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.393787  normal  0.0143668 
 
 
-
 
NC_010172  Mext_1450  formaldehyde-activating enzyme  30.82 
 
 
179 aa  77.4  0.0000000000005  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.485811 
 
 
-
 
NC_013517  Sterm_3212  3-hexulose-6-phosphate synthase  29.12 
 
 
211 aa  76.6  0.0000000000008  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1849  3-hexulose-6-phosphate synthase  30.88 
 
 
212 aa  76.3  0.0000000000009  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_3519  formaldehyde-activating enzyme  29.81 
 
 
211 aa  71.6  0.00000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0127  3-dehydro-L-gulonate-6-phosphate decarboxylase  29.09 
 
 
212 aa  69.3  0.0000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0145  3-dehydro-L-gulonate-6-phosphate decarboxylase  29.09 
 
 
212 aa  69.3  0.0000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2273  Orotidine 5'-phosphate decarboxylase  32.03 
 
 
240 aa  68.6  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3143  formaldehyde-activating protein  23.46 
 
 
182 aa  62  0.00000002  Methylobacterium extorquens PA1  Bacteria  normal  0.389753  normal  0.873661 
 
 
-
 
NC_011757  Mchl_3465  Formaldehyde-activating enzyme (Fae)  23.46 
 
 
182 aa  62  0.00000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.719607  normal 
 
 
-
 
NC_010725  Mpop_3340  Formaldehyde-activating enzyme (Fae)  23.46 
 
 
182 aa  61.2  0.00000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3403  Formaldehyde-activating enzyme (Fae)  23.46 
 
 
182 aa  60.5  0.00000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4467  formaldehyde-activating protein  23.46 
 
 
182 aa  60.5  0.00000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.164696 
 
 
-
 
NC_013421  Pecwa_3893  3-keto-L-gulonate-6-phosphate decarboxylase  28.82 
 
 
218 aa  60.5  0.00000006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03433  3-keto-L-gulonate 6-phosphate decarboxylase  26.09 
 
 
220 aa  55.5  0.000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03384  hypothetical protein  26.09 
 
 
220 aa  55.5  0.000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3696  3-keto-L-gulonate-6-phosphate decarboxylase  26.67 
 
 
218 aa  54.7  0.000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4078  3-keto-L-gulonate-6-phosphate decarboxylase  25.65 
 
 
220 aa  54.7  0.000003  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3937  3-keto-L-gulonate-6-phosphate decarboxylase  28.57 
 
 
218 aa  54.7  0.000003  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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