| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6933 |
|---|
| Symbol | |
|---|
| ID | 6279327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3304241 |
|---|
| End bp | 3304813 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642617960 |
|---|
| Product | formaldehyde-activating enzyme |
|---|
| Protein accession | YP_001890596 |
|---|
| Protein GI | 187921564 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1795] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03126] formaldehyde-activating enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.587797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACC TCACAATCGG CCATCCACTC AACCTCGACG GAACGACCAT GAGCGCATCG
ACGGACAAAC AACTCTTTAT CGGCGAAGGA TTCGAAGGCC CCGGCGTCAA TCTCGCGCAC
ATCAACGTAC TGGTCGGCCC GCGCAACGGC CCGGCAGGCC AGGCATTCGC CACCGCATTG
GCGACGCCTT CGGCGGGTCA CGCGCCGTTC GTCGTGATCG CGCGTCCGGG CGTGCCGACC
AAACCGCTCA CGCTGTATGT GAACAAGGCG CAGATCGGCA GCGACTTCCA CGGCAACGCG
ACGTGGGGCG CCTCGCAAGC CGGTATCGCG AAGGCGGTGG CCGAGTCGCT GGAGAACGGC
ACGCTGCCGC CAGAAGCGGA GAACGACTGG GTGGTGGTGT CGGCGAATTG GGTCAACCCG
TCGACCGACG ATCTCGACGC CGTCTTCGAG AACAACTACC GCGCGTGCAA GAGCGCAATC
GTCGCGGCGA TGAAGGGCCT GCCGCATCGC GATGAAGTCT TCGCCGCCGC GCGCGACGTA
TCGAACCCGT TCTACACACC GAAACAACGT TAA
|
|---|
| Protein sequence | MPNLTIGHPL NLDGTTMSAS TDKQLFIGEG FEGPGVNLAH INVLVGPRNG PAGQAFATAL
ATPSAGHAPF VVIARPGVPT KPLTLYVNKA QIGSDFHGNA TWGASQAGIA KAVAESLENG
TLPPEAENDW VVVSANWVNP STDDLDAVFE NNYRACKSAI VAAMKGLPHR DEVFAAARDV
SNPFYTPKQR
|
|---|
| |