Gene Rsph17025_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3165 
Symbol 
ID5085650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand+ 
Start bp27029 
End bp27706 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID640484737 
Producthypothetical protein 
Protein accessionYP_001169354 
Protein GI146279196 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.25915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.552325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG GTTTCCGCAT CAAACGCAGC TGGACCCGCA TCGGGGCCGA CATGGTCGCG 
GCCTTCCGCG ACCTGCCGGT GGCCAATGTC AGCGACAGCA TGTCCCGTCT GGCGGCCTTC 
GGCCCCGAAC TGCGGCCGAT GCACCGCTCG GGCGTGCTGG CCGGTCCCGC CCTGACGGTG 
CGCTCGCGCC CCGGCGACAA CCTGATGCTG CACAAGGCCA TCGACATGGC CGAGCCGGGC 
GATGTCATCG TGCTGGATGC GGGCGGCGAC ATGACCAACT CGCTGATGGG AGAGCTGATG 
CTGGCCCATG CCATTCGCCG CGGCGTGGCG GGTTTCGTCC TGCATGGCGC GATCCGTGAC 
GCCGAGGCGA TCCGCGAGCG CAACTTGCCG GTCTATGGCT GCGGCATCAC CCACCGTGGC 
CCCTATCGCA CAGGCCCCGG CGAGATCGGC CTTCCGATCT CGCTCGGGGG CTCGGTGATC 
CGGCCGGGTG ACCTGATCCT TGGCGATTAC GACGGCCTTG TGGCCGTGCC GCAGGACGAG 
GCCGAGACGA TCCTCGCCGC TGCCCGCAAG AAGCATGCGG CCGAGACGCG GCAGATGGCC 
GAGACCGAGG CCGGCACGCT GGACCGGGCC TGGGTCGACA AGGCGCTGGA GGCGGCCGGC 
TGCGTCTGGC TGGACTAG
 
Protein sequence
MTHGFRIKRS WTRIGADMVA AFRDLPVANV SDSMSRLAAF GPELRPMHRS GVLAGPALTV 
RSRPGDNLML HKAIDMAEPG DVIVLDAGGD MTNSLMGELM LAHAIRRGVA GFVLHGAIRD 
AEAIRERNLP VYGCGITHRG PYRTGPGEIG LPISLGGSVI RPGDLILGDY DGLVAVPQDE 
AETILAAARK KHAAETRQMA ETEAGTLDRA WVDKALEAAG CVWLD