More than 300 homologs were found in PanDaTox collection
for query gene Afer_1446 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  100 
 
 		 223 aa  432  1e-120  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  58.69 
 
 		 221 aa  252  3e-66  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  62 
 
 		 213 aa  251  6e-66  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  61.5 
 
 		 214 aa  246  2e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  59.33 
 
 		 218 aa  245  4e-64  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  58.77 
 
 		 223 aa  243  1.9999999999999999e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  59.09 
 
 		 226 aa  241  7.999999999999999e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  58.94 
 
 		 219 aa  237  1e-61  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  56.13 
 
 		 212 aa  235  4e-61  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  56.04 
 
 		 216 aa  234  6e-61  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  57.69 
 
 		 211 aa  234  7e-61  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  55.66 
 
 		 212 aa  234  1.0000000000000001e-60  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  55.83 
 
 		 233 aa  233  2.0000000000000002e-60  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  54.38 
 
 		 219 aa  231  9e-60  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  56.42 
 
 		 222 aa  230  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  56.54 
 
 		 239 aa  228  4e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  61.81 
 
 		 223 aa  226  1e-58  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  56.25 
 
 		 231 aa  224  6e-58  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  56.25 
 
 		 231 aa  224  8e-58  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  55.5 
 
 		 224 aa  224  1e-57  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  55.02 
 
 		 212 aa  221  6e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  55.34 
 
 		 216 aa  220  9.999999999999999e-57  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  57.56 
 
 		 225 aa  220  9.999999999999999e-57  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  53.59 
 
 		 216 aa  220  9.999999999999999e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  52.51 
 
 		 217 aa  219  1.9999999999999999e-56  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  55.34 
 
 		 209 aa  216  2.9999999999999998e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  54.95 
 
 		 216 aa  216  2.9999999999999998e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  54.95 
 
 		 244 aa  215  5e-55  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  54.46 
 
 		 213 aa  214  5.9999999999999996e-55  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  51.64 
 
 		 233 aa  214  7e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  53.05 
 
 		 220 aa  213  9.999999999999999e-55  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  53.05 
 
 		 215 aa  213  9.999999999999999e-55  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal  1 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  53.05 
 
 		 215 aa  213  9.999999999999999e-55  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.171113 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  52.09 
 
 		 216 aa  212  3.9999999999999995e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  51.49 
 
 		 254 aa  210  1e-53  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  55.98 
 
 		 218 aa  207  1e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  49.76 
 
 		 218 aa  206  2e-52  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.33 
 
 		 214 aa  205  5e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_2548  two component LuxR family transcriptional regulator  53.52 
 
 		 216 aa  202  3e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.971783  normal  1 
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  51.44 
 
 		 228 aa  200  1.9999999999999998e-50  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  51.44 
 
 		 228 aa  200  1.9999999999999998e-50  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  51.44 
 
 		 228 aa  200  1.9999999999999998e-50  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal  1 
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  53.37 
 
 		 218 aa  197  7e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  48.08 
 
 		 226 aa  197  7.999999999999999e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_013757  Gobs_4820  two component transcriptional regulator, LuxR family  51.9 
 
 		 218 aa  177  1e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  46.31 
 
 		 208 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_013521  Sked_11330  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.88 
 
 		 224 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.0103975 
 
 
-
 
NC_014151  Cfla_2290  two component transcriptional regulator, LuxR family  46.5 
 
 		 208 aa  162  3e-39  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.00802134  hitchhiker  0.000628596 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  43.35 
 
 		 221 aa  160  1e-38  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  41.51 
 
 		 242 aa  160  2e-38  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  44.55 
 
 		 207 aa  159  3e-38  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_008541  Arth_3459  two component LuxR family transcriptional regulator  41.92 
 
 		 212 aa  159  4e-38  Arthrobacter sp. FB24  Bacteria  normal  0.775478  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  40.47 
 
 		 234 aa  155  6e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  43.63 
 
 		 213 aa  155  7e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  38.42 
 
 		 213 aa  155  7e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_1701  response regulator receiver protein  43.59 
 
 		 224 aa  154  9e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0169479 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  44.12 
 
 		 213 aa  154  2e-36  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  41.55 
 
 		 221 aa  153  2e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  38.81 
 
 		 220 aa  153  2e-36  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  40.7 
 
 		 213 aa  153  2.9999999999999998e-36  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  39.22 
 
 		 222 aa  152  4e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  41.04 
 
 		 236 aa  152  5e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_010571  Oter_0647  two component LuxR family transcriptional regulator  40.78 
 
 		 225 aa  151  8e-36  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  39.34 
 
 		 253 aa  151  1e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  40.57 
 
 		 214 aa  150  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  38.76 
 
 		 217 aa  150  1e-35  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  39.81 
 
 		 234 aa  150  1e-35  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  39.51 
 
 		 213 aa  150  2e-35  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  37.38 
 
 		 225 aa  149  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  42.86 
 
 		 217 aa  149  3e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  41.71 
 
 		 227 aa  149  4e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008322  Shewmr7_1222  two component LuxR family transcriptional regulator  41.06 
 
 		 225 aa  149  4e-35  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1152  two component LuxR family transcriptional regulator  41.06 
 
 		 225 aa  148  5e-35  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  42.72 
 
 		 219 aa  148  5e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  42.16 
 
 		 224 aa  148  6e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.12 
 
 		 219 aa  148  6e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  41.75 
 
 		 228 aa  147  1.0000000000000001e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  41.71 
 
 		 219 aa  147  2.0000000000000003e-34  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1151  two component LuxR family transcriptional regulator  41.06 
 
 		 225 aa  146  2.0000000000000003e-34  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  35.24 
 
 		 231 aa  146  2.0000000000000003e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  38.89 
 
 		 241 aa  145  3e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  37.2 
 
 		 217 aa  145  6e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  39.71 
 
 		 210 aa  144  9e-34  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  39.71 
 
 		 210 aa  144  9e-34  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  39.71 
 
 		 210 aa  144  9e-34  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  39.71 
 
 		 210 aa  144  9e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  36.23 
 
 		 216 aa  144  9e-34  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  39.71 
 
 		 210 aa  144  9e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  39.71 
 
 		 210 aa  144  9e-34  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  39.71 
 
 		 210 aa  144  1e-33  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  38.31 
 
 		 210 aa  144  1e-33  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  43.27 
 
 		 225 aa  144  1e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  37.96 
 
 		 217 aa  144  1e-33  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  38.86 
 
 		 216 aa  144  1e-33  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_013172  Bfae_18340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.71 
 
 		 209 aa  144  1e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  38.69 
 
 		 207 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_008148  Rxyl_0094  two component LuxR family transcriptional regulator  41.59 
 
 		 222 aa  143  2e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  40.67 
 
 		 225 aa  143  2e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  40.76 
 
 		 230 aa  143  2e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  38.86 
 
 		 216 aa  143  2e-33  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
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