More than 300 homologs were found in PanDaTox collection
for query gene Swoo_1864 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_1864  short-chain dehydrogenase/reductase SDR  100 
 
 
237 aa  476  1e-134  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000294024 
 
 
-
 
NC_011312  VSAL_I1484  short chain dehydrogenase  50.85 
 
 
238 aa  221  6e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0301161  n/a   
 
 
-
 
NC_008009  Acid345_2262  short-chain dehydrogenase/reductase SDR  31.17 
 
 
244 aa  118  9.999999999999999e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000989308  normal 
 
 
-
 
NC_013161  Cyan8802_2434  short-chain dehydrogenase/reductase SDR  34.54 
 
 
274 aa  115  3.9999999999999997e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2383  short-chain dehydrogenase/reductase SDR  34.02 
 
 
274 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4168  short-chain dehydrogenase/reductase SDR  32.98 
 
 
252 aa  112  4.0000000000000004e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  33.04 
 
 
241 aa  112  6e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0668  short-chain dehydrogenase/reductase SDR  34.11 
 
 
234 aa  112  7.000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4962  short-chain dehydrogenase/reductase SDR  35.42 
 
 
290 aa  112  7.000000000000001e-24  'Nostoc azollae' 0708  Bacteria  unclonable  0.00000187582  n/a   
 
 
-
 
NC_007333  Tfu_1298  2-deoxy-D-gluconate 3-dehydrogenase  34.04 
 
 
249 aa  111  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  0.145366  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  32.81 
 
 
265 aa  111  1.0000000000000001e-23  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  32.81 
 
 
265 aa  110  1.0000000000000001e-23  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2194  short-chain dehydrogenase/reductase SDR  32.82 
 
 
280 aa  110  2.0000000000000002e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0155651  n/a   
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  33.16 
 
 
293 aa  109  3e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  34.09 
 
 
238 aa  109  5e-23  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  36.87 
 
 
264 aa  108  6e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  31.91 
 
 
262 aa  108  9.000000000000001e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  31.91 
 
 
262 aa  108  9.000000000000001e-23  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  36.87 
 
 
264 aa  107  1e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  36.87 
 
 
264 aa  107  1e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  31.91 
 
 
262 aa  108  1e-22  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_010644  Emin_0659  3-oxoacyl-(acyl-carrier-protein) reductase  34.02 
 
 
245 aa  107  1e-22  Elusimicrobium minutum Pei191  Bacteria  normal  0.372694  normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  36.87 
 
 
264 aa  107  1e-22  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  36.87 
 
 
264 aa  107  2e-22  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011729  PCC7424_3439  short-chain dehydrogenase/reductase SDR  35.08 
 
 
270 aa  107  2e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.349709 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  30.96 
 
 
257 aa  107  2e-22  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5053  short-chain dehydrogenase/reductase SDR  30.13 
 
 
247 aa  106  4e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.607642  normal  0.406832 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  35.86 
 
 
264 aa  105  5e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  35.86 
 
 
264 aa  105  5e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4592  short-chain dehydrogenase/reductase SDR  30.13 
 
 
247 aa  105  5e-22  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.278018 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  33.85 
 
 
253 aa  105  5e-22  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  36.36 
 
 
264 aa  105  6e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  36.36 
 
 
264 aa  105  7e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  36.65 
 
 
264 aa  105  8e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2402  short-chain dehydrogenase/reductase SDR  32.35 
 
 
278 aa  105  8e-22  Shewanella woodyi ATCC 51908  Bacteria  decreased coverage  0.000000841338  hitchhiker  0.00141318 
 
 
-
 
NC_012912  Dd1591_3635  short-chain dehydrogenase/reductase SDR  28.8 
 
 
265 aa  105  8e-22  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_3779  short-chain dehydrogenase/reductase SDR  31.02 
 
 
266 aa  104  9e-22  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00111461  n/a   
 
 
-
 
NC_008255  CHU_2193  short chain dehydrogenase/reductase family oxidoreductase  29.03 
 
 
235 aa  104  9e-22  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  decreased coverage  0.00806787 
 
 
-
 
NC_014150  Bmur_2667  3-oxoacyl-(acyl-carrier-protein) reductase  35.53 
 
 
249 aa  104  1e-21  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000000680764  n/a   
 
 
-
 
NC_009943  Dole_0115  short-chain dehydrogenase/reductase SDR  34.03 
 
 
278 aa  104  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2956  short-chain dehydrogenase/reductase SDR  30.61 
 
 
295 aa  104  1e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.5257  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  35.05 
 
 
258 aa  104  1e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  33.33 
 
 
258 aa  104  1e-21  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  30.84 
 
 
230 aa  103  2e-21  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1682  3-ketoacyl-(acyl-carrier-protein) reductase  29.52 
 
 
252 aa  103  2e-21  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1031  short-chain dehydrogenase/reductase SDR  34.52 
 
 
248 aa  103  2e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.961994  normal  0.547574 
 
 
-
 
NC_012793  GWCH70_1733  short chain dehydrogenase  29.84 
 
 
286 aa  103  2e-21  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  35.86 
 
 
264 aa  103  2e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  31.48 
 
 
238 aa  103  2e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_010551  BamMC406_1205  short-chain dehydrogenase/reductase SDR  31.44 
 
 
250 aa  103  2e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0796  short-chain dehydrogenase/reductase SDR  27.54 
 
 
249 aa  103  2e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0911  short-chain dehydrogenase/reductase SDR  30.18 
 
 
246 aa  103  3e-21  Clostridium cellulolyticum H10  Bacteria  normal  0.411552  n/a   
 
 
-
 
NC_010085  Nmar_0634  short-chain dehydrogenase/reductase SDR  29.26 
 
 
253 aa  103  3e-21  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011894  Mnod_3437  short-chain dehydrogenase/reductase SDR  31.75 
 
 
262 aa  102  4e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2371  3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR  34.38 
 
 
248 aa  102  5e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  30.54 
 
 
239 aa  102  5e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  30.67 
 
 
238 aa  102  5e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_007413  Ava_4667  Short-chain dehydrogenase/reductase SDR  28.76 
 
 
234 aa  102  6e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  29.81 
 
 
269 aa  102  8e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009664  Krad_2087  short-chain dehydrogenase/reductase SDR  32.28 
 
 
259 aa  101  9e-21  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_002620  TC0508  3-ketoacyl-(acyl-carrier-protein) reductase  33.85 
 
 
248 aa  100  1e-20  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  30.94 
 
 
238 aa  101  1e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  28.85 
 
 
259 aa  101  1e-20  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_011004  Rpal_5138  short-chain dehydrogenase/reductase SDR  29 
 
 
248 aa  101  1e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1233  short-chain dehydrogenase/reductase SDR  32 
 
 
269 aa  101  1e-20  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2231  Short-chain dehydrogenase/reductase SDR  31.96 
 
 
257 aa  101  1e-20  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000702714  hitchhiker  0.00000000852913 
 
 
-
 
NC_013730  Slin_3321  short-chain dehydrogenase/reductase SDR  31.79 
 
 
351 aa  101  1e-20  Spirosoma linguale DSM 74  Bacteria  normal  0.358421  normal 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  28.69 
 
 
257 aa  101  1e-20  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_013061  Phep_0979  short-chain dehydrogenase/reductase SDR  32.3 
 
 
254 aa  101  1e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.495407 
 
 
-
 
NC_008639  Cpha266_2492  3-oxoacyl-[acyl-carrier-protein] reductase  31.7 
 
 
245 aa  100  1e-20  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3792  short-chain dehydrogenase/reductase SDR  32.8 
 
 
290 aa  100  2e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  33.98 
 
 
259 aa  100  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2536  short chain dehydrogenase  31.05 
 
 
241 aa  100  2e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3521  short-chain dehydrogenase/reductase SDR  27.75 
 
 
265 aa  100  2e-20  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  35.98 
 
 
257 aa  100  3e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  29.58 
 
 
259 aa  99.8  3e-20  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013132  Cpin_4702  short-chain dehydrogenase/reductase SDR  33.68 
 
 
272 aa  100  3e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.315563  normal  0.0714958 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  31.35 
 
 
255 aa  100  3e-20  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_009511  Swit_2003  short-chain dehydrogenase/reductase SDR  34.85 
 
 
252 aa  100  3e-20  Sphingomonas wittichii RW1  Bacteria  normal  0.167955  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  31.84 
 
 
257 aa  100  3e-20  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000420  oxidoreductase short-chain dehydrogenase/reductase family  33.68 
 
 
239 aa  99.4  4e-20  Vibrio sp. Ex25  Bacteria  normal  0.637186  n/a   
 
 
-
 
NC_013132  Cpin_4842  short-chain dehydrogenase/reductase SDR  28.95 
 
 
249 aa  99.8  4e-20  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00384997  hitchhiker  0.000208801 
 
 
-
 
NC_009636  Smed_3033  short-chain dehydrogenase/reductase SDR  28.51 
 
 
251 aa  99.8  4e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.612185 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  30.36 
 
 
249 aa  99.8  4e-20  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_011898  Ccel_2089  short-chain dehydrogenase/reductase SDR  29.91 
 
 
246 aa  99.8  4e-20  Clostridium cellulolyticum H10  Bacteria  normal  0.0163129  n/a   
 
 
-
 
NC_009664  Krad_1946  short-chain dehydrogenase/reductase SDR  31.02 
 
 
299 aa  99  5e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  32.45 
 
 
258 aa  99  5e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  31 
 
 
250 aa  99.4  5e-20  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  32.26 
 
 
258 aa  99  6e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
242 aa  98.6  7e-20  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
242 aa  98.6  7e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
242 aa  98.6  7e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
242 aa  98.6  7e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3307  short-chain dehydrogenase/reductase SDR  30.81 
 
 
275 aa  98.6  7e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
242 aa  98.6  7e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_1786  short-chain dehydrogenase/reductase SDR  29.28 
 
 
246 aa  98.6  7e-20  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  31.72 
 
 
259 aa  98.6  7e-20  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_008782  Ajs_3278  3-oxoacyl-[acyl-carrier-protein] reductase  30.9 
 
 
246 aa  98.6  7e-20  Acidovorax sp. JS42  Bacteria  normal  normal  0.752219 
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
239 aa  98.6  8e-20  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  32.27 
 
 
239 aa  98.6  8e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
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