Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2965 |
Symbol | |
ID | 3681335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3675528 |
End bp | 3676409 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718312 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_323471 |
Protein GI | 75909175 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATTC GAGGTAAAGT AGCCCTGGTG ACTGGGGCTT CCCGTGGAAT TGGGCGAGCG ATCGCTTTAG AATTAGCACA ACAAGGAATA CACAGATTAA TTTTAGTGGC ACGCGATCGC CAAAAGTTAA GAGAAGTCGC CCAGGAAGTG GAGGCTATGG GAGTCCAAGC CACAACATTG GCGATTGATT TAACGCAAGC CACCGAGGTA AACATTGCCA TAGCGCAACT ATGGCGCAAT TACGGCCCCA TTCACTTACT TGTTAACTGT GCAGGCGTTG CATACCAAAG TTCATTCTTG CAATCAAAAC TTCCCCAAGT TCAAGAAGAA CTTTCTGTAA ACTTATTGGG AATGTATACC CTCACCAGCC TCATCGCCAA ACGTATGGCT AGCCAAAGAC AAGGAACTAT TGTCAATGTT TCCAGCTTAA TGGGGAAAGT AGCTGCACCA ACAATGGCGA CTTATTCAGC CACAAAGTTT GCTATCTTAG GCTTTACCCA AGCCTTGCGC CGCGAACTTG CTGAGTACAA CATCCAGGTG AAGGCGTTAT TACCATCCCT CACCGACACA GATATGGTGC GTGACTTAAA ACTATTTCGC TGGGTGATTC CCATGACACC CCAGGAAGTA GCCAAAGCGT TAATTACTGG ACTAGAAAAA GATGCACCAG AAATTTTAGT AGGATGGCAA AGTCATTTAG CCGTGTGGTG TCAACGTTTA GCCCCTTGGT TACTGGAATT GGTTTTAAAA ATTGCCACAC CACCAGCTAT TAGACAACAA CAATCTGACG AAAACTTGAG CTTTTGGGCA AAAATCCAGC GTTTTGGCGA TTTCTTCTTT TCTGGAAACA AGTTTCCCTT CGTATTCGCC CGTAAAACCT GA
|
Protein sequence | MNIRGKVALV TGASRGIGRA IALELAQQGI HRLILVARDR QKLREVAQEV EAMGVQATTL AIDLTQATEV NIAIAQLWRN YGPIHLLVNC AGVAYQSSFL QSKLPQVQEE LSVNLLGMYT LTSLIAKRMA SQRQGTIVNV SSLMGKVAAP TMATYSATKF AILGFTQALR RELAEYNIQV KALLPSLTDT DMVRDLKLFR WVIPMTPQEV AKALITGLEK DAPEILVGWQ SHLAVWCQRL APWLLELVLK IATPPAIRQQ QSDENLSFWA KIQRFGDFFF SGNKFPFVFA RKT
|
| |