| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2003 |
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| Symbol | |
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| ID | 5198751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2243514 |
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| End bp | 2244272 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581548 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262501 |
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| Protein GI | 148554919 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.167955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCG CCGGCCGCGC CGCGTTGGTG ACGGGGGCCG CGAGCGGCAT CGGCCGCGCG
GTCGCCCGCG CCTTCGCCGG AGAAGGCGCG CGGGTCTGGC TGGCCGATAT GGACGCGGCC
GGCGTGGCGG CGGCGGCGGA CGCGATCGGG CCGCCCGCCA GGGCGATCGA GCTGGATGTC
TCCGACCCCG CAGCCGTCGG TCGAACGGTC GCGGCGATCG ACGCGGAGGC CGGGGGGATC
GACCTGCTCG TCAACGCCGC CGGACGCTAC GCCCTCCAGC CCTGGCTGGA GATCGAGCCC
GAGACCTGGG ACCGGATCTT CGCCGTCAAC ACCCGCGGGA TCATGCTCAC GACGCAGGCC
GTGGCGCGCG TGATGGCCGC GCGCGGAAAG GGCGGATCGA TCATCAACAT CGCCTCGGCC
GCGGGCCGTC GCGGCGATCC CAATTCGGTC GCCTATTCGG CGAGCAAGGC CGCCGCGATC
AGCATCACCC AGTCGGCGGC GCTCGGCCTC GCCCCCCATG GCATCCGCGT CAATGCGATC
GCCCCCGGCC CGGTCGACAC GCCGATGTGG GACGAAGTCG TCCGGCTGCG GGCGGGACGC
GGCGATCATA GCGCCGAGCA GATGGCGGCG CGGGTGCCGC TCGGCCGCAT CTCGGCGCCG
GAGGAGCAGG CGCGGGTCGC CCTGTTCCTG GCCGGCGCCG ACAGCGGCTA TGTCACCGGG
CAGACCTTCA ATGTCGATGG AGGCCTGTTT CCGAGCTGA
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| Protein sequence | MTLAGRAALV TGAASGIGRA VARAFAGEGA RVWLADMDAA GVAAAADAIG PPARAIELDV
SDPAAVGRTV AAIDAEAGGI DLLVNAAGRY ALQPWLEIEP ETWDRIFAVN TRGIMLTTQA
VARVMAARGK GGSIINIASA AGRRGDPNSV AYSASKAAAI SITQSAALGL APHGIRVNAI
APGPVDTPMW DEVVRLRAGR GDHSAEQMAA RVPLGRISAP EEQARVALFL AGADSGYVTG
QTFNVDGGLF PS
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