Gene Rsph17029_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1031 
Symbol 
ID4895487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1064193 
End bp1064939 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID640111618 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001042914 
Protein GI126461800 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.961994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.547574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA CGGCGGTTGT GACGGGGGCG GCGCGCGGGA TCGGGCGCGC GCTCGCGGTG 
GGGCTCGCAG AGGCGGGCTA CGATGTGGCG GTGACGGATC TGGCCGCGCA GGCCGAGGGG
CTGGCCGAGA CGCGCGCGCT GATCGAGGCC GCGGGCCGGC GCGCCTTCGT CGAGACGGTG
GATGTCTCGG ACCGGGCCGC GGTCGTCGCC GCGATGGCGC GGATCGAGGA AGCCGCGGGC
GGGATCGACG TGCTGGTGAA CAATGCGGGC ATCCTGAAGC CCGCGCGGCT CGAGGATCTC
TCGGAGGCCG ACTGGGACGC CCATATGGAC GTGAACGTGA AGGGCGTCCT GTCCTGCTGT
CAGGCGGTGC TGCCGGGGAT GCGCGCGCGC AAGGCCGGGC GGATCGTCAA CATCGCCTCC
ATCGCGGGCC GTCAGGGCGT GCCGACGCAG GGCCATTATG CGGCGACCAA GGCCGCCGTC
ATTACCCTGA CGCGGGTGCT GGCGCAGGAG GCCGGCATGG ACGGGATCAC CGTCAATGCC
ATCTGCCCGG GCATCATCCT GACCGAGATG GGCAAGAACA ACCTCGGCTC GGACGAGGCC
ATCCGCCACT GGGAAGAGGT GGCCGCGCTG AAGCGCCTCG GCGCGCCCGA AGATATCGTG
GGGCCGGTCC TGTTCTTCGC GGGCGAGCAG TCGGCCTTCG TCACCGGGCA GGCGCTGAAC
GTCTGCGGCG GGATCTACTT CCATTAG
 
Protein sequence
MTKTAVVTGA ARGIGRALAV GLAEAGYDVA VTDLAAQAEG LAETRALIEA AGRRAFVETV 
DVSDRAAVVA AMARIEEAAG GIDVLVNNAG ILKPARLEDL SEADWDAHMD VNVKGVLSCC
QAVLPGMRAR KAGRIVNIAS IAGRQGVPTQ GHYAATKAAV ITLTRVLAQE AGMDGITVNA
ICPGIILTEM GKNNLGSDEA IRHWEEVAAL KRLGAPEDIV GPVLFFAGEQ SAFVTGQALN
VCGGIYFH