Gene Gmet_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2231 
Symbol 
ID3738185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2525357 
End bp2526130 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID637779523 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_385183 
Protein GI78223436 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0000702714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00000000852913 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGTCA GCGAATTGTT CAGCCTGAAA GGAAAAACAG CCATCATCAC CGGAGGCTCG 
AGGGGACTGG GTCTGATGAT GGCGGAAGGG TTTGCAGAGG CGGGAGCCAG TCTTGTTCTC
TGCTCGAGAA ATTTGGAGCA GTGCGAGGAC GCGGCGGCCA ATATCCGCAA ACTTGGTGTG
GAATGCGATG CCCTGCGCTG TGACATCGGG GAACAGGATG AGGTCAAGGC CGTGGTGGCC
CATACGATGA ACAGGTTCGG AAAGATCGAC ATCCTGGTGA ACAATGCCGG CATCTCGTGG
GGTGGGGAAC TGCAGGACAC GCCGCTCAAG AAATGGGATC AGCTCTACAG CACCAATGTT
CGCGGCAACT ATTTCTTTAC CACTGAAGTC GTCTCCCCCA TGATTGCCGG CGGCGGCGGG
AATATCATTA ACATCGTCTC CATCGGCGGA GTGCGCTCAA CGGATCCAAA GGTGGTGACA
TTCCCCGCGT ACGCTTCTAC CAAAGGGGCG ATCATAGCAC TGACAAAGCA TCTGTCCCGC
AACTGGGCCA AGCACAACAT TCGCGTCAAT GCCATCGCAC CCGGCATTTT CCCGACAGAG
ATCAGCAAAA CCCTGATGGT CGGCCCGCAA AAAGCGGTCA TGGAAGCTGC AGTGCCGCTT
GGACGCCTTG GTGAAAAGGA CGATTTCAAA GGGGCAGCGC TCTTTTTGGC CGCTGATGCC
TCACGCTACG TCACGGGATC GGTTTTATGG GTTGATGGAG GTATGCTGGC CTAA
 
Protein sequence
MHVSELFSLK GKTAIITGGS RGLGLMMAEG FAEAGASLVL CSRNLEQCED AAANIRKLGV 
ECDALRCDIG EQDEVKAVVA HTMNRFGKID ILVNNAGISW GGELQDTPLK KWDQLYSTNV
RGNYFFTTEV VSPMIAGGGG NIINIVSIGG VRSTDPKVVT FPAYASTKGA IIALTKHLSR
NWAKHNIRVN AIAPGIFPTE ISKTLMVGPQ KAVMEAAVPL GRLGEKDDFK GAALFLAADA
SRYVTGSVLW VDGGMLA