| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1786 |
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| Symbol | |
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| ID | 5774649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1632027 |
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| End bp | 1632767 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641317442 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001583120 |
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| Protein GI | 161529294 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTAAAG ATAAAGTAGC AATAATTACT GGAGCTAGTA GTGGTATTGG ATTTGCCACT
GCTTTAGCAT TATCAAAAGC AGGTGCAAAA GTTGCTATTG GTGCCAGAAG AGTTGATAGA
TTAGAGGAAC TTGCAAACAA AATTACTGAA AATGGTGGAG AAATATTTTA TCAAAAATTA
GATGTCACAC AAAAATCAGA ATGTGATGAT TTTGCAAAAG CTGTTTTAGA AAAATGGAAT
TCTATTGATA TTTTAGTAAA TAACGCAGGA CTCATGCCTC TAAGCTTCTT CAAAAATCTC
AAAGTAGATG AATGGGACAG AATGATTGAT GTGAATATCA AAGGCGTATT GTATTCTACT
GCAGCAGTAA TTACACACAT GAAAGAAAAA AAATCTGGTC ATATTGTTAA TTTGTCCTCT
GTAGCAGGAA GAATTGTCTT TCCTGCTGGT AGTGTGTATT GTGCAACAAA ACATGCAGTT
GCAGCATTTA GTGAGGGATT AAGACAAGAA TTCAGTATAC GTTCAAACAT TAGAGTAACA
AGTATTGAAC CTGGTGTTGT GGATACAGAA CTCAATAACA CAATCACTGA TGAATCCTTA
AAGGGATTTG TAGAAAATGC AGCAAAGATG GAAGCTTTAC ATGCTGAAGA TATAGCAAAT
GCCATTTTGT ATGCAGTAGA CTCACCATCT TATGTTAATG TCAATGAAAT CCTGATAAGA
CCTACAACAC AAGAACGTTA A
|
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| Protein sequence | MIKDKVAIIT GASSGIGFAT ALALSKAGAK VAIGARRVDR LEELANKITE NGGEIFYQKL
DVTQKSECDD FAKAVLEKWN SIDILVNNAG LMPLSFFKNL KVDEWDRMID VNIKGVLYST
AAVITHMKEK KSGHIVNLSS VAGRIVFPAG SVYCATKHAV AAFSEGLRQE FSIRSNIRVT
SIEPGVVDTE LNNTITDESL KGFVENAAKM EALHAEDIAN AILYAVDSPS YVNVNEILIR
PTTQER
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