Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1205 |
Symbol | |
ID | 6177948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1332368 |
End bp | 1333120 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680961 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001807912 |
Protein GI | 172060260 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA TCGAATTGAG CGGCCGAGTG GTCGTGATCA CGGGCGGCGC ACGCGGCATC GGCTATGCGG CCGCGCAGCG GGCGCTGCGC TCGGGGGCGG CGGTGTCGCT GTGGGACGTC GACGGGGAGC GGCTCGCGCG CAGCCAGCGC GAACTGTCGG AACTCGGCAC CGTATCGACC GTCGTCGTCG AATTGACCGA TGAAGCATCC GTCGACGCCG CGGCCACGGC CACATTCGAG CGGCACGGTG CGATCGACGT GCTGATCAAC AGCGCCGGTA TCACGGGGGG TAACGGTCTG ACGTGGGAAC TGCCGCCCGA TGTCTGGCGC CGCGTGATCG ACGTGAACCT GATCGGCTCG TATCTAACGT GCCGCGCCGT GGTGCCGCGA ATGCTCGAGA AGGGCTACGG CCGCATCGTC AACATCGCAT CGGTGGCCGG CAAGGAAGGC AATCCGACCG CATCGCACTA CAGTGCCTCG AAGGCCGGCC TGATCGGCCT CACGAAATCG CTCGGCAAGG AGCTGGCGAC CCGCGGCATC CTCGTGAATG CCGTCACGCC GGCGGCAGCG AAGACCGAGA TCTTCGACTC GATGTCGCAG CAGCATATCG ACTACATGCT GTCGAAGATA CCGATGAACC GCTTTCTGAT GCCGGAAGAG GCGGCCTCGC TGATCCTGTG GCTCGCGTCC GAGGATTGCG CATTCAGCAC CGGGGCCGTA TTCGACCTGT CGGGCGGCCG CGCCACCTAT TGA
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Protein sequence | MNQIELSGRV VVITGGARGI GYAAAQRALR SGAAVSLWDV DGERLARSQR ELSELGTVST VVVELTDEAS VDAAATATFE RHGAIDVLIN SAGITGGNGL TWELPPDVWR RVIDVNLIGS YLTCRAVVPR MLEKGYGRIV NIASVAGKEG NPTASHYSAS KAGLIGLTKS LGKELATRGI LVNAVTPAAA KTEIFDSMSQ QHIDYMLSKI PMNRFLMPEE AASLILWLAS EDCAFSTGAV FDLSGGRATY
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