| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2402 |
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| Symbol | |
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| ID | 6116676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2944651 |
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| End bp | 2945487 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633910 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001760775 |
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| Protein GI | 170726749 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000841338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00141318 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTGT CGAACGCTAA AGGTAAGCTC GCTGTTATAA CGGGTGGTTC AAGTGGCTTG
GGCTATGCCA TTGCCAAAGA GCTAGCCAGC AAGGGGTTCG ATTTACTGTT GGTCGCTAGA
AATGAGGCGC AGTTAAAAGA AGCCTCCAGC AAGTTAATTG CCGACTCGGG TGTCAAGGTA
CACACAACTA GCGTGGATGT AAGCAAGGAA GAAGACGTAC TTTCTCTAAA AGAGACTGTT
AGGTCGTTGG CTCCATGCGC AGATATCATT GTTAATAGTG CAGGTATCGT CAGTGGTGGT
TTCCTAGTGG ATACCCCGCT AGCAGAATGG GATCGTTTGT ATAATGTGAA TGTGCGCGGT
CTTGTCTCTG TTCTTAAGAG CTTGTTGCCA GATATGATCG AACAGGGCGG CAGTGATGGG
CAAGAGAGGC ATATCGTGAA TATCGCCTCA GCTGCGGCTT ATACTGCAAC AGGCGGAATG
TCAGCTTACG GTTCTACCAA GGCCGGTGTA TTGGCGTTAA GTGAGAGCCT TGCTCATGAG
GTTGCGCCGA GTCATGTTGG TGTAACAACG GTTTGCCCTG AGTTTGTTAA AACGCCGATT
GGTAGCAAAG TAATGCTATT TGGTCGTATG GATAATGCGC GTTCAAAAAG AATCATAGAG
AAAATGTTTG ATCGCAGCAC CATCACAACG GATGAGTTAG CGGTAAAAGT GCTTAAGGCC
ATTACTTCAG GCAAGCTCGT CGTTCCTGCC GGTAAGCAAG CGACTATTGC GTATCATTTC
AAGCGAGTAA TGCCTGTACG CTTCTTCAAG ATGATTGACA AAGCGCTTAG ATTTTAA
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| Protein sequence | MKLSNAKGKL AVITGGSSGL GYAIAKELAS KGFDLLLVAR NEAQLKEASS KLIADSGVKV
HTTSVDVSKE EDVLSLKETV RSLAPCADII VNSAGIVSGG FLVDTPLAEW DRLYNVNVRG
LVSVLKSLLP DMIEQGGSDG QERHIVNIAS AAAYTATGGM SAYGSTKAGV LALSESLAHE
VAPSHVGVTT VCPEFVKTPI GSKVMLFGRM DNARSKRIIE KMFDRSTITT DELAVKVLKA
ITSGKLVVPA GKQATIAYHF KRVMPVRFFK MIDKALRF
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