| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1484 |
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| Symbol | |
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| ID | 6987133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1594166 |
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| End bp | 1594882 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379823 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002262923 |
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| Protein GI | 209694994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0301161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATGT CTAAATTGGC ACTAATTACG GGAGCAAGTC GAGGTATAGG AAAAGCGATT
TCTCACTACT TTGCTCAGCA AGGTTATTCA CTTATTTTAG TCTCATTAAA TAAAGACAAC
CTCAATGCCA CAAAATTAGA GTTAGAAGCC CACTACCCGT CGAGTTGCAT CGAAACCATC
AGCGTCGATT TTAATAACCC CGCAGACGTT GAATCTGCCA TCTCTTCAAT CATTGCTGAG
CATAGCTCTA TCGATGTAAT GGTAAACAGC GCAGGTGTTC TCATGGCAGG ACACACGAAC
TTAACGCTAA AGCAGCTTTC TGAATTAATA AACGTAAATC TACTTTCTAC GATTACGGCC
TGTAATTTGG TTATCGAAAA AATGAAACAA CAAGGCTATG GTGAGATTTA TAATATTGGA
TCAACCGCAG GTTTAGAACC CGTACCAAAG ATCGCCGCGT ACTCTGCCAC AAAAGCCGCT
ATTGTGAGTT ATAGCCAATC GCTTTATCAC GAACTTCTTC CCTTTAATAT AAAGGTATGT
TGTTTATGTC CAAGCGTTGT CGATACTGAC ATGACCAACG ATGGCCGTAT TATGAACAAC
CTAAAAATCG AAACTCAAGA TTTAACTAAA GCCATCGATT TTATACGCAA CTTGTCGCCA
AGTGCCAGTA TGTCGACACT CTCTATACGT TGTAAAACCA TTGATTTAGA AAAGTAA
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| Protein sequence | MVMSKLALIT GASRGIGKAI SHYFAQQGYS LILVSLNKDN LNATKLELEA HYPSSCIETI
SVDFNNPADV ESAISSIIAE HSSIDVMVNS AGVLMAGHTN LTLKQLSELI NVNLLSTITA
CNLVIEKMKQ QGYGEIYNIG STAGLEPVPK IAAYSATKAA IVSYSQSLYH ELLPFNIKVC
CLCPSVVDTD MTNDGRIMNN LKIETQDLTK AIDFIRNLSP SASMSTLSIR CKTIDLEK
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