Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000420 |
Symbol | |
ID | 8558726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 477232 |
End bp | 477951 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408086 |
Product | oxidoreductase short-chain dehydrogenase/reductase family |
Protein accession | YP_003287573 |
Protein GI | 262395720 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.637186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TAATTGTTAT TACAGGCGCT AGTTCAGGCA TTGGTGAAGC GATTGCACGT CATTTCAGCG AACAGGGCCA TGCTCTTCTT TTGTTAGCAA GACGTGTAGA ACGTTTAGAA GCATTAAACT TGCCAAATGC GCTTTGTGAA AAGGTAGATG TGATCGATAA AGCTTCTTTT GAAGCGGCAA TTGAGAAAGC TGAAGCGTTG TATGGTCCGG TAGATGCACT TGTAAATAAC GCAGGCGTTA TGCTTCTAGG CCAGATAGAT ACTCAGGACG CATCGGAGTG GAAGCGCATG TTCGATGTGA ACGTACTTGG CTTGCTAAAT GGCATGCAGT CCGTTTTAGC ACCGATGAAA GCGCGTAACA GTGGTACGAT CATTAATATC AGCTCTATTG CGGGCAAGAA AACATTTCCT GATCATGCCG CTTACTGTGG TACCAAATTT GCGGTTCATG CGATTTCTGA AAACGTACGT GAAGAAGTCG CATCATCGAA TGTTCGTGTT ACGACTATTG CACCTGGCGC AGTGGAAACT GAATTACTTT CACATACTAC GTCTCAAGAT ATTAAAGATG GCTATGATGC TTGGAAAGAG GATATGGGGG GCGTGTTGGC AGCCGACGAT ATTGCACGAG CAGTGCTGTT TGCTTATCAG CAACCGCAAG GTGTATGTGT TCGCGAAATT GCTTTGGCAC CAACAAAACA GCAACCTTAA
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Protein sequence | MKKLIVITGA SSGIGEAIAR HFSEQGHALL LLARRVERLE ALNLPNALCE KVDVIDKASF EAAIEKAEAL YGPVDALVNN AGVMLLGQID TQDASEWKRM FDVNVLGLLN GMQSVLAPMK ARNSGTIINI SSIAGKKTFP DHAAYCGTKF AVHAISENVR EEVASSNVRV TTIAPGAVET ELLSHTTSQD IKDGYDAWKE DMGGVLAADD IARAVLFAYQ QPQGVCVREI ALAPTKQQP
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