Gene VEA_000420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000420 
Symbol 
ID8558726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp477232 
End bp477951 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content45% 
IMG OID646408086 
Productoxidoreductase short-chain dehydrogenase/reductase family 
Protein accessionYP_003287573 
Protein GI262395720 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.637186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TAATTGTTAT TACAGGCGCT AGTTCAGGCA TTGGTGAAGC GATTGCACGT 
CATTTCAGCG AACAGGGCCA TGCTCTTCTT TTGTTAGCAA GACGTGTAGA ACGTTTAGAA
GCATTAAACT TGCCAAATGC GCTTTGTGAA AAGGTAGATG TGATCGATAA AGCTTCTTTT
GAAGCGGCAA TTGAGAAAGC TGAAGCGTTG TATGGTCCGG TAGATGCACT TGTAAATAAC
GCAGGCGTTA TGCTTCTAGG CCAGATAGAT ACTCAGGACG CATCGGAGTG GAAGCGCATG
TTCGATGTGA ACGTACTTGG CTTGCTAAAT GGCATGCAGT CCGTTTTAGC ACCGATGAAA
GCGCGTAACA GTGGTACGAT CATTAATATC AGCTCTATTG CGGGCAAGAA AACATTTCCT
GATCATGCCG CTTACTGTGG TACCAAATTT GCGGTTCATG CGATTTCTGA AAACGTACGT
GAAGAAGTCG CATCATCGAA TGTTCGTGTT ACGACTATTG CACCTGGCGC AGTGGAAACT
GAATTACTTT CACATACTAC GTCTCAAGAT ATTAAAGATG GCTATGATGC TTGGAAAGAG
GATATGGGGG GCGTGTTGGC AGCCGACGAT ATTGCACGAG CAGTGCTGTT TGCTTATCAG
CAACCGCAAG GTGTATGTGT TCGCGAAATT GCTTTGGCAC CAACAAAACA GCAACCTTAA
 
Protein sequence
MKKLIVITGA SSGIGEAIAR HFSEQGHALL LLARRVERLE ALNLPNALCE KVDVIDKASF 
EAAIEKAEAL YGPVDALVNN AGVMLLGQID TQDASEWKRM FDVNVLGLLN GMQSVLAPMK
ARNSGTIINI SSIAGKKTFP DHAAYCGTKF AVHAISENVR EEVASSNVRV TTIAPGAVET
ELLSHTTSQD IKDGYDAWKE DMGGVLAADD IARAVLFAYQ QPQGVCVREI ALAPTKQQP