Gene PCC7424_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3439 
Symbol 
ID7112054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3838654 
End bp3839466 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID643481681 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002378702 
Protein GI218440373 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.349709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG AAGGAAAAAC CGCTTTAGTA ACCGGTGCTT CTCGGGGAAT TGGACGAGCG 
ATCGCTCTAG AATTAGCCCA ACAAGGAATT AAACGCCTGT TACTGGTCGC TAGGGATCGC
TCTCGTTTAG CGGCGCTAGC CCAAGAAATC AAAGCCTTGG GCGTAGAAAC CATAACCCTA
GCCCTAGATC TGACTCAACC GATAGAAGTT AATGTAGCGA TCGCCAGAGC TTGGAAAACT
CACGGGCCAA TTCATTTGCT GGTTAACTGT GCGGGAGTCG CCCACCAAGC CCCCTTTTTA
GAGTCTGATC CCCAAAAAAT TGGGGAAGAA ATTTCCCTCA ATGTCATGGG AATGTACAAT
ATTACCCGTC TCGTGGCCAA ACGCATGGTC ACACAACGAG AAGGAACAAT TGTCAATGTT
TCTAGCCTCA TGGGGAAAGT GGCAGCCCCC ACCATGTCCA CCTATTCAGC CACCAAATTT
GCGATCGTCG GCTTTACCCA AGCCTTAAGA AGTGAACTCG CCCCTTATAA TATCCGAGTG
GTCGCGTTGC TGCCTTCTTT AACCCATACA GACATGATTA AAAGATTGCA ACTATTTCGG
GGGGTATTAC CGATGACTCC TGAACAAGTG GCAAAAGCTT TGATGGTAGG ATTACGTCAA
GACTTATCAG AAATCCTAGT CGGATGGCAA AGTCACTTAG CCATTTGGTG TCTTCGTCTG
GCCCCTTGGC TATTAGATAA AATTCTCGTC TTGACTTCTC CCTTAGCAAG ATTTTCCCGA
AAAACGGCGA ACCAGTTAAC AGTAACCAGT TAA
 
Protein sequence
MNIEGKTALV TGASRGIGRA IALELAQQGI KRLLLVARDR SRLAALAQEI KALGVETITL 
ALDLTQPIEV NVAIARAWKT HGPIHLLVNC AGVAHQAPFL ESDPQKIGEE ISLNVMGMYN
ITRLVAKRMV TQREGTIVNV SSLMGKVAAP TMSTYSATKF AIVGFTQALR SELAPYNIRV
VALLPSLTHT DMIKRLQLFR GVLPMTPEQV AKALMVGLRQ DLSEILVGWQ SHLAIWCLRL
APWLLDKILV LTSPLARFSR KTANQLTVTS