More than 300 homologs were found in PanDaTox collection
for query gene Sfri_2758 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_2758  glucose-1-phosphate thymidylyltransferase  100 
 
 
295 aa  608  1e-173  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.36633  n/a   
 
 
-
 
NC_009052  Sbal_2866  glucose-1-phosphate thymidylyltransferase  69.83 
 
 
295 aa  421  1e-117  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1338  glucose-1-phosphate thymidylyltransferase  68.92 
 
 
312 aa  422  1e-117  Shewanella sp. MR-4  Bacteria  normal  0.182375  hitchhiker  0.00118285 
 
 
-
 
NC_008322  Shewmr7_1403  glucose-1-phosphate thymidylyltransferase  68.92 
 
 
312 aa  422  1e-117  Shewanella sp. MR-7  Bacteria  normal  normal  0.0784803 
 
 
-
 
NC_009997  Sbal195_3012  glucose-1-phosphate thymidylyltransferase  69.15 
 
 
295 aa  418  1e-116  Shewanella baltica OS195  Bacteria  normal  normal  0.635856 
 
 
-
 
NC_008577  Shewana3_1391  glucose-1-phosphate thymidylyltransferase  68.58 
 
 
312 aa  419  1e-116  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00918938 
 
 
-
 
NC_009831  Ssed_2955  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
308 aa  417  9.999999999999999e-116  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1681  glucose-1-phosphate thymidylyltransferase  61.46 
 
 
292 aa  374  1e-102  Shewanella woodyi ATCC 51908  Bacteria  normal  0.180776  normal 
 
 
-
 
NC_009831  Ssed_3013  glucose-1-phosphate thymidylyltransferase  62.5 
 
 
296 aa  369  1e-101  Shewanella sediminis HAW-EB3  Bacteria  normal  0.515318  hitchhiker  0.00164401 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  58.74 
 
 
292 aa  361  9e-99  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3295  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
294 aa  359  3e-98  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.00238421  n/a   
 
 
-
 
NC_011206  Lferr_2893  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
294 aa  359  3e-98  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.413887 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  58.04 
 
 
292 aa  358  7e-98  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  57.69 
 
 
292 aa  355  5e-97  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  57.69 
 
 
293 aa  354  8.999999999999999e-97  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  57.14 
 
 
292 aa  353  2e-96  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  57.24 
 
 
292 aa  350  1e-95  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  57.34 
 
 
297 aa  350  1e-95  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  57.44 
 
 
293 aa  349  4e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  57.34 
 
 
297 aa  348  5e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  56.99 
 
 
293 aa  348  6e-95  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  56.25 
 
 
292 aa  348  6e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  55.59 
 
 
295 aa  347  1e-94  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  56.06 
 
 
305 aa  347  2e-94  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  55.02 
 
 
296 aa  345  5e-94  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2101  glucose-1-phosphate thymidylyltransferase  58.04 
 
 
294 aa  345  6e-94  Synechococcus elongatus PCC 7942  Bacteria  normal  0.338319  normal 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  56.4 
 
 
293 aa  345  6e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  55.94 
 
 
294 aa  343  2e-93  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  56.6 
 
 
305 aa  343  2e-93  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2629  glucose-1-phosphate thymidylyltransferase  56.99 
 
 
298 aa  343  2e-93  Marinobacter aquaeolei VT8  Bacteria  normal  0.357597  n/a   
 
 
-
 
NC_007778  RPB_1565  glucose-1-phosphate thymidylyltransferase  56.79 
 
 
292 aa  343  2.9999999999999997e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.995779 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  56.64 
 
 
299 aa  342  4e-93  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  56.99 
 
 
297 aa  342  4e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  55.94 
 
 
294 aa  342  4e-93  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  56.64 
 
 
297 aa  342  4e-93  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  56.99 
 
 
297 aa  342  5.999999999999999e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  56.51 
 
 
310 aa  341  7e-93  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  56.99 
 
 
297 aa  341  7e-93  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0774  glucose-1-phosphate thymidylyltransferase, long form  55.74 
 
 
292 aa  341  9e-93  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  55.71 
 
 
296 aa  341  9e-93  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  56.84 
 
 
291 aa  340  1e-92  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  56.64 
 
 
296 aa  340  1e-92  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  55.94 
 
 
297 aa  340  1e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  55.94 
 
 
297 aa  340  2e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  54.74 
 
 
294 aa  340  2e-92  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  55.02 
 
 
294 aa  340  2e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  55.67 
 
 
296 aa  340  2e-92  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  55.94 
 
 
297 aa  340  2e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  56.64 
 
 
291 aa  340  2e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  55.59 
 
 
294 aa  339  2.9999999999999998e-92  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_007958  RPD_1574  glucose-1-phosphate thymidylyltransferase  56.1 
 
 
292 aa  338  4e-92  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.446194 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  53.26 
 
 
292 aa  338  5.9999999999999996e-92  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  55.24 
 
 
294 aa  338  5.9999999999999996e-92  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  55.24 
 
 
293 aa  338  9e-92  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
294 aa  338  9e-92  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_008825  Mpe_A0626  glucose-1-phosphate thymidylyltransferase  55.36 
 
 
294 aa  337  9.999999999999999e-92  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.353924 
 
 
-
 
NC_012892  B21_01934  hypothetical protein  58.8 
 
 
270 aa  337  1.9999999999999998e-91  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0639  glucose-1-phosphate thymidylyltransferase  54.3 
 
 
294 aa  337  1.9999999999999998e-91  Ralstonia pickettii 12J  Bacteria  normal  normal  0.477683 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  54.67 
 
 
294 aa  336  1.9999999999999998e-91  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  55.59 
 
 
297 aa  336  1.9999999999999998e-91  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
312 aa  336  1.9999999999999998e-91  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  55.9 
 
 
292 aa  337  1.9999999999999998e-91  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  55.02 
 
 
293 aa  336  2.9999999999999997e-91  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  56.14 
 
 
297 aa  336  2.9999999999999997e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  55.59 
 
 
293 aa  336  2.9999999999999997e-91  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  55.14 
 
 
312 aa  335  3.9999999999999995e-91  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  53.47 
 
 
293 aa  335  7e-91  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  56.69 
 
 
291 aa  335  7e-91  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  54.36 
 
 
291 aa  334  1e-90  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  55.24 
 
 
293 aa  333  1e-90  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4445  glucose-1-phosphate thymidylyltransferase  55.59 
 
 
294 aa  333  1e-90  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  53.61 
 
 
290 aa  333  2e-90  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  54.86 
 
 
294 aa  333  2e-90  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  53.45 
 
 
292 aa  333  3e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
312 aa  333  3e-90  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
297 aa  332  4e-90  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
297 aa  332  4e-90  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  53.98 
 
 
292 aa  332  4e-90  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
297 aa  332  4e-90  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
297 aa  332  4e-90  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
297 aa  332  4e-90  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  54.64 
 
 
299 aa  332  4e-90  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  53.31 
 
 
295 aa  332  5e-90  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0541  glucose-1-phosphate thymidylyltransferase  54.55 
 
 
297 aa  332  5e-90  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1283  glucose-1-phosphate thymidylyltransferase  54.83 
 
 
295 aa  331  8e-90  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0255  glucose-1-phosphate thymidylyltransferase  54.17 
 
 
309 aa  331  8e-90  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.201113  n/a   
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  56.49 
 
 
305 aa  331  8e-90  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_009253  Dred_3038  glucose-1-phosphate thymidylyltransferase  55.24 
 
 
292 aa  331  9e-90  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  53.63 
 
 
298 aa  331  9e-90  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_010831  Cphamn1_1894  glucose-1-phosphate thymidylyltransferase  53.95 
 
 
292 aa  330  1e-89  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.284713  normal  0.0266706 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  54.2 
 
 
293 aa  330  2e-89  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_010625  Bphy_6726  glucose-1-phosphate thymidylyltransferase  54.74 
 
 
317 aa  330  2e-89  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_1919  glucose-1-phosphate thymidylyltransferase  52.94 
 
 
298 aa  329  3e-89  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.2077 
 
 
-
 
NC_009485  BBta_1073  glucose-1-phosphate thymidylyltransferase  55.63 
 
 
296 aa  329  4e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_4427  glucose-1-phosphate thymidylyltransferase  54.9 
 
 
294 aa  328  5.0000000000000004e-89  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2858  glucose-1-phosphate thymidylyltransferase  55.09 
 
 
289 aa  328  6e-89  Dickeya zeae Ech1591  Bacteria  normal  0.0450568  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  53.68 
 
 
293 aa  328  6e-89  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  56.07 
 
 
288 aa  328  6e-89  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_013131  Caci_8194  glucose-1-phosphate thymidylyltransferase  53.33 
 
 
289 aa  328  7e-89  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  54.55 
 
 
297 aa  328  8e-89  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
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