More than 300 homologs were found in PanDaTox collection
for query gene Ssed_2955 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_2955  glucose-1-phosphate thymidylyltransferase  100 
 
 
308 aa  627  1e-179  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3012  glucose-1-phosphate thymidylyltransferase  74.31 
 
 
295 aa  441  1e-123  Shewanella baltica OS195  Bacteria  normal  normal  0.635856 
 
 
-
 
NC_009052  Sbal_2866  glucose-1-phosphate thymidylyltransferase  74.31 
 
 
295 aa  439  9.999999999999999e-123  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1391  glucose-1-phosphate thymidylyltransferase  74.31 
 
 
312 aa  433  1e-120  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00918938 
 
 
-
 
NC_008321  Shewmr4_1338  glucose-1-phosphate thymidylyltransferase  73.26 
 
 
312 aa  430  1e-119  Shewanella sp. MR-4  Bacteria  normal  0.182375  hitchhiker  0.00118285 
 
 
-
 
NC_008322  Shewmr7_1403  glucose-1-phosphate thymidylyltransferase  73.26 
 
 
312 aa  430  1e-119  Shewanella sp. MR-7  Bacteria  normal  normal  0.0784803 
 
 
-
 
NC_008345  Sfri_2758  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
295 aa  417  9.999999999999999e-116  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.36633  n/a   
 
 
-
 
NC_010506  Swoo_1681  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
292 aa  377  1e-103  Shewanella woodyi ATCC 51908  Bacteria  normal  0.180776  normal 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  62.15 
 
 
293 aa  372  1e-102  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_009831  Ssed_3013  glucose-1-phosphate thymidylyltransferase  63.19 
 
 
296 aa  371  1e-102  Shewanella sediminis HAW-EB3  Bacteria  normal  0.515318  hitchhiker  0.00164401 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  60.84 
 
 
292 aa  370  1e-101  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  60.21 
 
 
293 aa  370  1e-101  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  60.49 
 
 
292 aa  369  1e-101  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
296 aa  369  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2101  glucose-1-phosphate thymidylyltransferase  61.59 
 
 
294 aa  370  1e-101  Synechococcus elongatus PCC 7942  Bacteria  normal  0.338319  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  61.11 
 
 
305 aa  368  1e-101  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  61.46 
 
 
297 aa  370  1e-101  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  62.02 
 
 
305 aa  368  1e-101  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
292 aa  370  1e-101  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  60.84 
 
 
292 aa  369  1e-101  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  59.59 
 
 
295 aa  364  1e-100  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
296 aa  367  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3295  glucose-1-phosphate thymidylyltransferase  59.11 
 
 
294 aa  364  1e-99  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.00238421  n/a   
 
 
-
 
NC_011206  Lferr_2893  glucose-1-phosphate thymidylyltransferase  59.11 
 
 
294 aa  364  1e-99  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.413887 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
296 aa  363  2e-99  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  59.23 
 
 
292 aa  363  2e-99  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  60.14 
 
 
294 aa  363  3e-99  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  59.59 
 
 
295 aa  362  5.0000000000000005e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  60.42 
 
 
297 aa  362  5.0000000000000005e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  60.42 
 
 
297 aa  362  5.0000000000000005e-99  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  59.86 
 
 
297 aa  362  6e-99  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  60.42 
 
 
297 aa  362  6e-99  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  60.14 
 
 
294 aa  361  7.0000000000000005e-99  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  60.49 
 
 
297 aa  361  7.0000000000000005e-99  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  60.42 
 
 
312 aa  361  8e-99  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
293 aa  361  1e-98  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  60.07 
 
 
293 aa  361  1e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  59.03 
 
 
294 aa  360  2e-98  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
294 aa  360  2e-98  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
292 aa  360  2e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
292 aa  360  2e-98  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
294 aa  360  2e-98  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  60.07 
 
 
312 aa  359  3e-98  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  58.22 
 
 
293 aa  359  3e-98  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  58.39 
 
 
298 aa  358  5e-98  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  59.44 
 
 
294 aa  358  5e-98  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  60.07 
 
 
297 aa  358  6e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007484  Noc_0774  glucose-1-phosphate thymidylyltransferase, long form  59.86 
 
 
292 aa  358  8e-98  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
297 aa  358  8e-98  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_008740  Maqu_2629  glucose-1-phosphate thymidylyltransferase  61.54 
 
 
298 aa  358  8e-98  Marinobacter aquaeolei VT8  Bacteria  normal  0.357597  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  60.07 
 
 
296 aa  358  9e-98  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
293 aa  357  9.999999999999999e-98  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  60 
 
 
293 aa  357  9.999999999999999e-98  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  60.42 
 
 
293 aa  357  9.999999999999999e-98  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  58.39 
 
 
298 aa  357  9.999999999999999e-98  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  58.39 
 
 
298 aa  357  9.999999999999999e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
293 aa  357  9.999999999999999e-98  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
297 aa  356  1.9999999999999998e-97  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
312 aa  356  1.9999999999999998e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  59.03 
 
 
310 aa  357  1.9999999999999998e-97  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
297 aa  356  1.9999999999999998e-97  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
297 aa  356  1.9999999999999998e-97  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
291 aa  356  1.9999999999999998e-97  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1619  glucose-1-phosphate thymidylyltransferase  58.42 
 
 
295 aa  357  1.9999999999999998e-97  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  60.49 
 
 
290 aa  356  1.9999999999999998e-97  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
297 aa  356  1.9999999999999998e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
297 aa  356  1.9999999999999998e-97  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  57.29 
 
 
290 aa  357  1.9999999999999998e-97  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  60 
 
 
292 aa  357  1.9999999999999998e-97  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  60.84 
 
 
291 aa  356  1.9999999999999998e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
297 aa  356  2.9999999999999997e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_011369  Rleg2_0403  glucose-1-phosphate thymidylyltransferase  58.76 
 
 
303 aa  356  2.9999999999999997e-97  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.504553 
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  58.56 
 
 
292 aa  355  5e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0541  glucose-1-phosphate thymidylyltransferase  57.34 
 
 
297 aa  355  5e-97  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  60.14 
 
 
293 aa  355  6.999999999999999e-97  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  59.03 
 
 
293 aa  354  1e-96  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  57.54 
 
 
294 aa  353  1e-96  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  59.03 
 
 
297 aa  353  2e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  57.53 
 
 
292 aa  353  2.9999999999999997e-96  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  58.9 
 
 
299 aa  352  2.9999999999999997e-96  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
297 aa  352  4e-96  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
NC_007964  Nham_3052  glucose-1-phosphate thymidylyltransferase  57.24 
 
 
298 aa  351  8e-96  Nitrobacter hamburgensis X14  Bacteria  normal  0.664934  n/a   
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  58.68 
 
 
293 aa  351  8e-96  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  59.58 
 
 
305 aa  351  8.999999999999999e-96  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  59.58 
 
 
296 aa  350  1e-95  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  59.11 
 
 
296 aa  350  2e-95  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_011369  Rleg2_1181  glucose-1-phosphate thymidylyltransferase  58.54 
 
 
289 aa  350  2e-95  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.25108  normal  0.28241 
 
 
-
 
NC_008786  Veis_0696  glucose-1-phosphate thymidylyltransferase  57.64 
 
 
294 aa  350  2e-95  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.53714  normal 
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  59.58 
 
 
293 aa  349  3e-95  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  57.84 
 
 
294 aa  349  3e-95  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  58.6 
 
 
293 aa  348  5e-95  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  58.6 
 
 
293 aa  348  5e-95  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01934  hypothetical protein  61.42 
 
 
270 aa  348  5e-95  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1783  glucose-1-phosphate thymidylyltransferase  60.07 
 
 
293 aa  348  6e-95  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00712451 
 
 
-
 
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