| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1338 |
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| Symbol | |
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| ID | 4251357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1551247 |
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| End bp | 1552185 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638117922 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_733473 |
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| Protein GI | 113969680 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.182375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00118285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTACAAT CATCCCTTCA CTTTGACTCA CTAATCCTTG ATATATCAAT GAGAAAAGGC
ATTTTATTGG CTGGCGGGAC CGGTTCTCGC CTATATCCGA TGACACAGGT TGTATGTAAG
CAGTTATTGC CTATTTACGA TAAACCAATG ATTTATTATC CACTTGTGAC CTTAATGCAG
GCTGGCATAA AAGAGATTTT AATTATCTGT ACACGCAGTG ATTTGCCTCT TTTTCAGGCA
TTGCTTGGTG ATGGTCACCG TTGGGGCATT CAGCTTGAAT ATGCGGTACA GCCTTCTCCA
AAGGGATTAG CCGAAGCACT TATTATCGGA GAGGCTTTTT TGGCGGGAGA GGCCTGTGCG
TTGATTCTGG GCGATAACTT ATTTTATGGG CAGCAACTGA GCACAAACTT GCATAGAGCT
TATCTACTCG AAGTGGGGGC GACCGTTTTT GGCTACCATG TGGCTAATCC GAATGCCTAC
GGCGTTGTCG AGTTTGATAA GAGAGGAAGG GCGATTTCAA TCGAAGAGAA ACCCCGAGTT
GCGCGTTCTT CCTATGCTAT TCCTGGATTG TATTTCTTTG ATAACAGGGC TAGTGAATGG
GCTAAAAAAG TGATGCCTTC GGCGCGGGGC GAGTTGGAGA TCGTTGATCT AATCAATCAA
TATCTTCTGT TGGGGGAATT GCAGGTAGAA ATAATGGGGC GGGGCACTGC TTGGCTCGAT
ACGGGAACGC CGGATGCGAT GGCTGAAGCA ACACAATTTA TTGCTGCTAT AGAAAAACGC
CAAGGGTTGA AAGTGAACTG TCCTGAAGAG GTTGCTTTTC ATTCTGGTTG GATAGATGCT
GCGCAGCTTA CTGCTTTAGC ACAACCTTTG CTTAAAAGCG GTTATGGTGA GTATCTTTTA
GGATTATTAA ATAAGCAGGT GTTTAATGAA GTGCATTGA
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| Protein sequence | MLQSSLHFDS LILDISMRKG ILLAGGTGSR LYPMTQVVCK QLLPIYDKPM IYYPLVTLMQ
AGIKEILIIC TRSDLPLFQA LLGDGHRWGI QLEYAVQPSP KGLAEALIIG EAFLAGEACA
LILGDNLFYG QQLSTNLHRA YLLEVGATVF GYHVANPNAY GVVEFDKRGR AISIEEKPRV
ARSSYAIPGL YFFDNRASEW AKKVMPSARG ELEIVDLINQ YLLLGELQVE IMGRGTAWLD
TGTPDAMAEA TQFIAAIEKR QGLKVNCPEE VAFHSGWIDA AQLTALAQPL LKSGYGEYLL
GLLNKQVFNE VH
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