Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1403 |
Symbol | |
ID | 4258572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1622657 |
End bp | 1623595 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638122037 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_737459 |
Protein GI | 114046909 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0784803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACAAT CATCCCTTCA CTTTGACTCA CTAATCCTTG ATATATCAAT GAGAAAAGGC ATTTTATTGG CTGGCGGGAC CGGTTCTCGC CTATATCCGA TGACACAGGT TGTATGTAAG CAGTTATTGC CTATTTACGA TAAACCAATG ATTTATTATC CACTTGTGAC CTTAATGCAG GCTGGCATAA AAGAGATTTT AATTATCTGT ACACGCAGTG ATTTGCCTCT TTTTCAGGCA TTGCTTGGTG ATGGTCACCG TTGGGGCATT CAGCTTGAAT ATGCGGTACA GCCTTCTCCA AAGGGATTAG CCGAAGCACT TATTATCGGA GAGGCTTTTT TGGCGGGAGA GGCCTGTGCG TTGATTCTGG GCGATAACTT ATTTTATGGG CAGCAACTGA GCACAAACTT GCATAGAGCT TATCTACTCG AAGTGGGGGC GACCGTTTTT GGCTACCATG TGGCTAATCC GAATGCCTAC GGCGTTGTCG AGTTTGATAA GAGAGGAAGG GCGATTTCAA TCGAAGAGAA ACCCCGAGTT GCGCGTTCTT CCTATGCTAT TCCTGGATTG TATTTCTTTG ATAACAGGGC TAGTGAATGG GCTAAAAAAG TGATGCCTTC GGCGCGGGGC GAGTTGGAGA TCGTTGATCT AATCAATCAA TATCTTCTGT TGGGGGAATT GCAGGTAGAA ATAATGGGGC GGGGCACTGC TTGGCTCGAT ACGGGAACGC CGGATGCGAT GGCTGAAGCA ACACAATTTA TTGCTGCTAT AGAAAAACGC CAAGGGTTGA AAGTGAACTG TCCTGAAGAG GTTGCTTTTC ATTCTGGTTG GATAGATGCT GCGCAGCTTA CCGCTTTAGC ACAACCTTTG CTTAAAAGCG GTTATGGTGA GTATCTCTTG GGATTATTAA ATAAGCAGGT GTTTAATGAA GTGCATTGA
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Protein sequence | MLQSSLHFDS LILDISMRKG ILLAGGTGSR LYPMTQVVCK QLLPIYDKPM IYYPLVTLMQ AGIKEILIIC TRSDLPLFQA LLGDGHRWGI QLEYAVQPSP KGLAEALIIG EAFLAGEACA LILGDNLFYG QQLSTNLHRA YLLEVGATVF GYHVANPNAY GVVEFDKRGR AISIEEKPRV ARSSYAIPGL YFFDNRASEW AKKVMPSARG ELEIVDLINQ YLLLGELQVE IMGRGTAWLD TGTPDAMAEA TQFIAAIEKR QGLKVNCPEE VAFHSGWIDA AQLTALAQPL LKSGYGEYLL GLLNKQVFNE VH
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