| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2955 |
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| Symbol | |
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| ID | 5610654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3579994 |
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| End bp | 3580920 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933895 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001474690 |
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| Protein GI | 157376090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG GCATTATTTT AGCGGGTGGT ACAGGCTCTC GCTTGTTCCC TATAACACAG
GTCGTGAGTA AACAGCTGCT GCCTGTCTAT GATAAGCCTA TGATCTATTA CCCACTATCG
ACTCTGATGC AGGCGGGGAT CACTGAAATA TTACTTATCT GCACCCCTGT CGATAAACCC
TTGTTTGAAA CCTTATTGAA AGACGGAAGC CAATGGGGAA TCTCCCTTCA CTATGCCGAG
CAAGCTAAGC CAAATGGACT TGCTGAGGCA TTAATCATCG CAGAGCCATT TCTCAATGGT
GAAGCTTGTG CACTGATCTT AGGGGATAAC CTATTCTACG GTAATGCACT GAGCACTTTA
TTGACCGATA TTAGCTCAAA TAGTAAAGGG GCAACCGTTT TTGGATATCA CGTTGCTAAC
CCCAAAGATT ACGGTGTTGT TTCGTTCGAT AGCTCTGGTA AGGTTTTGTC TATTGAAGAG
AAACCGAATC AACCTAAATC TCAATATGCT ATGCCTGGCC TGTACTTCTT TGATAATCGA
GCCCCCCAAT TCGCAAAGCA GGTTAAGCCT TCGGCTCGCA ATGAACTCGA GATAGTCGAT
GTTATTAATG CTTACTTATC GGCAGGTGAG TTGAGTGTAA ATATTTTGGG AAGGGGAACG
GCTTGGCTGG ATACCGGGAA CCCCGATGCA CTGTCTGAAG CGACGCAATT TATCGCAGCA
ATCGAAAAAC GACAAGGCCT TAAAGTGAAT TGCCCGGAGG AGGTCGCTTA CCGTTTAGGT
TTAATAGGCG CTGTCCAAGT AAAAACGTTA GCACAACCCT TGTTGAAAAG CGGATATGGT
GAGTACTTAT TAAGCCTGTT GGATGATCCA TGTAAGACCG GCTTTAGCCG GGAAGGGCTA
TTGTCGGATC GATTTAAGCT GAGCTAG
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| Protein sequence | MRKGIILAGG TGSRLFPITQ VVSKQLLPVY DKPMIYYPLS TLMQAGITEI LLICTPVDKP
LFETLLKDGS QWGISLHYAE QAKPNGLAEA LIIAEPFLNG EACALILGDN LFYGNALSTL
LTDISSNSKG ATVFGYHVAN PKDYGVVSFD SSGKVLSIEE KPNQPKSQYA MPGLYFFDNR
APQFAKQVKP SARNELEIVD VINAYLSAGE LSVNILGRGT AWLDTGNPDA LSEATQFIAA
IEKRQGLKVN CPEEVAYRLG LIGAVQVKTL AQPLLKSGYG EYLLSLLDDP CKTGFSREGL
LSDRFKLS
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