More than 300 homologs were found in PanDaTox collection
for query gene Cphamn1_1894 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_1894  glucose-1-phosphate thymidylyltransferase  100 
 
 
292 aa  595  1e-169  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.284713  normal  0.0266706 
 
 
-
 
NC_010831  Cphamn1_1914  glucose-1-phosphate thymidylyltransferase  91.07 
 
 
298 aa  547  1e-155  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00943889 
 
 
-
 
NC_010831  Cphamn1_1919  glucose-1-phosphate thymidylyltransferase  86.25 
 
 
298 aa  521  1e-147  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.2077 
 
 
-
 
NC_011059  Paes_1760  glucose-1-phosphate thymidylyltransferase  85.57 
 
 
298 aa  518  1e-146  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0453677 
 
 
-
 
NC_011059  Paes_1726  glucose-1-phosphate thymidylyltransferase  84.88 
 
 
291 aa  513  1e-144  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00000315653  normal  0.563962 
 
 
-
 
NC_010803  Clim_1781  glucose-1-phosphate thymidylyltransferase  79.24 
 
 
298 aa  488  1e-137  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000367124  n/a   
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  79.38 
 
 
299 aa  489  1e-137  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
NC_011060  Ppha_2300  glucose-1-phosphate thymidylyltransferase  76.12 
 
 
293 aa  476  1e-133  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.390759  n/a   
 
 
-
 
NC_007512  Plut_0416  glucose-1-phosphate thymidylyltransferase, long form  75.6 
 
 
292 aa  473  1e-132  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0512  glucose-1-phosphate thymidylyltransferase, long form  75.26 
 
 
295 aa  467  9.999999999999999e-131  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  75 
 
 
293 aa  466  9.999999999999999e-131  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1563  glucose-1-phosphate thymidylyltransferase  70 
 
 
289 aa  436  1e-121  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  68.38 
 
 
290 aa  424  1e-118  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  68.04 
 
 
292 aa  422  1e-117  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
292 aa  417  1e-116  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  67.94 
 
 
296 aa  419  1e-116  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  68.97 
 
 
287 aa  418  1e-116  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  69.2 
 
 
305 aa  420  1e-116  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  67.7 
 
 
292 aa  420  1e-116  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
293 aa  416  9.999999999999999e-116  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  66.44 
 
 
294 aa  414  9.999999999999999e-116  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  66.44 
 
 
292 aa  415  9.999999999999999e-116  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  66.44 
 
 
292 aa  412  1e-114  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  68.49 
 
 
290 aa  412  1e-114  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
294 aa  412  1e-114  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  66.44 
 
 
286 aa  413  1e-114  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
294 aa  410  1e-114  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
292 aa  410  1e-113  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
294 aa  410  1e-113  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
289 aa  409  1e-113  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  65.74 
 
 
294 aa  409  1e-113  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
289 aa  406  1.0000000000000001e-112  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  65.62 
 
 
296 aa  407  1.0000000000000001e-112  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
293 aa  405  1.0000000000000001e-112  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  64.04 
 
 
295 aa  407  1.0000000000000001e-112  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
293 aa  407  1.0000000000000001e-112  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  67.01 
 
 
289 aa  406  1.0000000000000001e-112  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
289 aa  407  1.0000000000000001e-112  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  65.86 
 
 
293 aa  404  1.0000000000000001e-112  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  65.62 
 
 
286 aa  405  1.0000000000000001e-112  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
291 aa  405  1.0000000000000001e-112  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
310 aa  407  1.0000000000000001e-112  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
293 aa  407  1.0000000000000001e-112  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  63.45 
 
 
294 aa  401  1e-111  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  65.74 
 
 
296 aa  404  1e-111  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  65.74 
 
 
305 aa  403  1e-111  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  66.21 
 
 
293 aa  403  1e-111  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  63.45 
 
 
294 aa  401  1e-111  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  67.71 
 
 
291 aa  401  1e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
296 aa  400  9.999999999999999e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
296 aa  400  9.999999999999999e-111  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
292 aa  398  9.999999999999999e-111  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  64.6 
 
 
293 aa  399  9.999999999999999e-111  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  64.95 
 
 
289 aa  398  9.999999999999999e-111  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  65.05 
 
 
289 aa  398  9.999999999999999e-111  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1299  glucose-1-phosphate thymidylyltransferase  65.52 
 
 
291 aa  400  9.999999999999999e-111  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
293 aa  399  9.999999999999999e-111  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  63.32 
 
 
304 aa  395  1e-109  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  62.98 
 
 
293 aa  396  1e-109  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
307 aa  397  1e-109  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  64.6 
 
 
293 aa  395  1e-109  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  63.57 
 
 
296 aa  396  1e-109  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
299 aa  395  1e-109  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  62.2 
 
 
288 aa  396  1e-109  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  63.67 
 
 
296 aa  395  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  63.54 
 
 
297 aa  395  1e-109  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  62.2 
 
 
292 aa  395  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
293 aa  396  1e-109  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_008321  Shewmr4_1319  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
291 aa  395  1e-109  Shewanella sp. MR-4  Bacteria  normal  normal  0.0322301 
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  64.36 
 
 
295 aa  394  1e-109  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01934  hypothetical protein  67.66 
 
 
270 aa  394  1e-109  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  61.3 
 
 
293 aa  395  1e-109  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  61.99 
 
 
291 aa  392  1e-108  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_012912  Dd1591_2858  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
289 aa  392  1e-108  Dickeya zeae Ech1591  Bacteria  normal  0.0450568  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  64.14 
 
 
293 aa  391  1e-108  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  64.36 
 
 
294 aa  392  1e-108  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_013422  Hneap_1491  glucose-1-phosphate thymidylyltransferase  62.67 
 
 
290 aa  391  1e-108  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
293 aa  392  1e-108  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4134  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.886764  normal 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
297 aa  391  1e-108  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  63.79 
 
 
298 aa  394  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  64.26 
 
 
292 aa  394  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
296 aa  392  1e-108  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1011  glucose-1-phosphate thymidylyltransferase  65.86 
 
 
292 aa  394  1e-108  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  63.79 
 
 
298 aa  392  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  63.57 
 
 
293 aa  392  1e-108  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
293 aa  391  1e-108  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
293 aa  391  1e-108  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  63.79 
 
 
298 aa  394  1e-108  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  63.54 
 
 
297 aa  388  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_0305  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
294 aa  388  1e-107  Campylobacter curvus 525.92  Bacteria  normal  0.132763  n/a   
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  63.19 
 
 
297 aa  390  1e-107  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
297 aa  389  1e-107  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
295 aa  389  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
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