| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1574 |
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| Symbol | |
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| ID | 4022054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1766799 |
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| End bp | 1767677 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637961769 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_568712 |
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| Protein GI | 91976053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.446194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGG TTTCCAAGGG CATCATTCTG GCAGGGGGAA CAGGAACGCG CCTGCATCCG
ATGACGGTGT CAGCCTCCAA GCAACTGCTG CCGATCTATG ACAAGCCGTT GATCTACTAT
CCGCTATCCA CGCTGATGAT GGCGGGCATC CGCGAGATCC TGGTGATCTC GACCCCGGCG
GACCTGCCGC GGTTCCAGCA GTTGCTGGGC GATGGCGAGC GCTGGGGGAT GTCGTTCAGC
TATGCCGAGC AGCCTCGCCC CGAGGGGCTG GCGCAGGCTT ACATCATTGG CGCCGACTTC
GTGGCTGGTG GACCCTCGGC TCTTGTGCTC GGTGACAACC TTTTCTACGG CCACGATTTG
ATCGCGTTGT TGCAAAGCGC GGCGAGCCAT GGCGAAGGCG CCACCGTGTT CGCCTATCAG
GTCAGCGACG CCAGCGCCTA TGGAGTCGTC GAGTTCGACG AAAACCAGTT GGCGATCTCG
ATCGAGGAGA AGCCGGTGGC GCCCCGATCG AACTGGGCTG TGACCGGCGT GTATTTCTAT
GATTCTCATG TGGTGGATAT AGCCGCCAAT CTGACGCCTT CGGCGCGCGG CGAACTCGAG
ATCACCGACG TCAATCGGGC CTATCTCGAA CGCAAGCAGC TTCGCGTCGA AAGGATGGGC
CGGGGGTTTG CGTGGCTCGA TACGGGCACG CCTGACAACC TGCTGGATGC GGCCGAATTC
GTGCGCGTTC TGGAAAAACG GCAGGGTCTC AAGATTTGCT GTCCCGAGGA AATTGCCTTC
CACATGAACT GGATCGATGC CGGGCAACTC GAGAATCTCG CCAAGCCGAT TGCGAACAGT
GGCTATGGCC GATATCTGCT CGACGTCGCC CGACGTTGA
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| Protein sequence | MTKVSKGIIL AGGTGTRLHP MTVSASKQLL PIYDKPLIYY PLSTLMMAGI REILVISTPA
DLPRFQQLLG DGERWGMSFS YAEQPRPEGL AQAYIIGADF VAGGPSALVL GDNLFYGHDL
IALLQSAASH GEGATVFAYQ VSDASAYGVV EFDENQLAIS IEEKPVAPRS NWAVTGVYFY
DSHVVDIAAN LTPSARGELE ITDVNRAYLE RKQLRVERMG RGFAWLDTGT PDNLLDAAEF
VRVLEKRQGL KICCPEEIAF HMNWIDAGQL ENLAKPIANS GYGRYLLDVA RR
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