Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1565 |
Symbol | |
ID | 3908764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1763766 |
End bp | 1764644 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883461 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_485186 |
Protein GI | 86748690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.995779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG TTTCCAAGGG CATCATTCTC GCAGGCGGCA GTGGGACGCG GCTGTATCCG ATGACGGTGT CGGCCTCTAA GCAGCTGCTG CCGATCTACG ACAAGCCGCT GATCTACTAC CCGCTGTCGA CGCTGATGAT GGCGGGCATC CGCGACATCC TGGTGATCTC GACCCCGGCG GACCTGCCGC GATTCCAGCA ATTGCTCGGC GACGGCGCGC GCTGGGGGAT GTCGTTCAGC TACGCCGAGC AGCCGCGCCC CGAAGGGCTG GCGCAGGCCT ACATCATCGG CGCCGATTTC GTCGCCGGCG GGCCCTCCGC GCTCGTGCTC GGCGACAATC TGTTTTACGG CCACGATCTG ATTCCGCTGC TGCGGAAGGC GGCGGGCCAG TGCGACGGCG CCACCGTGTT CGCCTATCAG GTGCGCGATC CGCAGGCCTA CGGCGTCGTC GAATTCGACG ACAACCAGAC CGCGCTCTCG ATCGAGGAGA AGCCGGCGAC CCCGCGATCC AACTGGGCGG TGACCGGCGT GTACTTCTAC GATTCACAGG CCGTCGAAAT CGCCGCCGGG CTGAAACCGT CGGCGCGCGG CGAACTCGAG ATCACCGATC TCAACCGGGC CTATCTCGAA CGCGGTCAAC TCCGCGTCGA AAAGATGGGG CGCGGTTTCG CTTGGCTCGA TACTGGGACG CCGGACAGTC TGCTGGAGGC GGCCGAGTTC GTGCGCATCC TGGAAAAGCG GCAGGGCCTC AAGATCTGCT GCCCCGAAGA GATCGCCTTC CATATGAAGT GGATCGACGC CGATCAGCTC GAAGCTTTGG CGAAGCCGAT CGCGAACAGC GGCTATGGCC GCTATTTGCT CGCTATCGCG CAACGCTGA
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Protein sequence | MTTVSKGIIL AGGSGTRLYP MTVSASKQLL PIYDKPLIYY PLSTLMMAGI RDILVISTPA DLPRFQQLLG DGARWGMSFS YAEQPRPEGL AQAYIIGADF VAGGPSALVL GDNLFYGHDL IPLLRKAAGQ CDGATVFAYQ VRDPQAYGVV EFDDNQTALS IEEKPATPRS NWAVTGVYFY DSQAVEIAAG LKPSARGELE ITDLNRAYLE RGQLRVEKMG RGFAWLDTGT PDSLLEAAEF VRILEKRQGL KICCPEEIAF HMKWIDADQL EALAKPIANS GYGRYLLAIA QR
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