More than 300 homologs were found in PanDaTox collection
for query gene SYO3AOP1_1388 on replicon NC_010730
Organism: Sulfurihydrogenibium sp. YO3AOP1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010730  SYO3AOP1_1388  glucose-1-phosphate thymidylyltransferase  100 
 
 
295 aa  595  1e-169  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000213303  n/a   
 
 
-
 
NC_011126  HY04AAS1_1540  glucose-1-phosphate thymidylyltransferase  71.23 
 
 
294 aa  437  1e-121  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1570  glucose-1-phosphate thymidylyltransferase  71.23 
 
 
294 aa  437  1e-121  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0379  glucose-1-phosphate thymidylyltransferase  61.86 
 
 
292 aa  380  1e-104  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  60.21 
 
 
293 aa  375  1e-103  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  60.41 
 
 
292 aa  373  1e-102  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  58.36 
 
 
296 aa  369  1e-101  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_013926  Aboo_0257  glucose-1-phosphate thymidylyltransferase  61.38 
 
 
290 aa  368  1e-101  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00751655  n/a   
 
 
-
 
NC_002950  PG1563  glucose-1-phosphate thymidylyltransferase  56.55 
 
 
289 aa  365  1e-100  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  59.17 
 
 
289 aa  364  1e-100  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  55.33 
 
 
288 aa  365  1e-100  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  60.69 
 
 
287 aa  367  1e-100  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1299  glucose-1-phosphate thymidylyltransferase  57.73 
 
 
291 aa  366  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1914  glucose-1-phosphate thymidylyltransferase  58.36 
 
 
298 aa  366  1e-100  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00943889 
 
 
-
 
NC_010831  Cphamn1_1919  glucose-1-phosphate thymidylyltransferase  58.16 
 
 
298 aa  366  1e-100  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.2077 
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  58.82 
 
 
299 aa  366  1e-100  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  57 
 
 
293 aa  367  1e-100  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_011060  Ppha_2300  glucose-1-phosphate thymidylyltransferase  56.66 
 
 
293 aa  367  1e-100  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.390759  n/a   
 
 
-
 
NC_010803  Clim_1781  glucose-1-phosphate thymidylyltransferase  56.12 
 
 
298 aa  363  2e-99  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000367124  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
286 aa  363  3e-99  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  56.8 
 
 
294 aa  362  4e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  56.8 
 
 
294 aa  362  4e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0511  glucose-1-phosphate thymidylyltransferase  59.59 
 
 
290 aa  362  4e-99  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
289 aa  361  7.0000000000000005e-99  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1760  glucose-1-phosphate thymidylyltransferase  57.68 
 
 
298 aa  360  1e-98  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0453677 
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  57.44 
 
 
304 aa  360  2e-98  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  55.78 
 
 
295 aa  360  2e-98  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  56.9 
 
 
294 aa  359  3e-98  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  55.71 
 
 
292 aa  358  5e-98  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  55.36 
 
 
292 aa  358  5e-98  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  55.1 
 
 
291 aa  358  5e-98  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_008261  CPF_0597  glucose-1-phosphate thymidylyltransferase  57.82 
 
 
293 aa  358  5e-98  Clostridium perfringens ATCC 13124  Bacteria  normal  0.290033  n/a   
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  58.68 
 
 
286 aa  358  7e-98  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_009901  Spea_1399  glucose-1-phosphate thymidylyltransferase  56.21 
 
 
290 aa  358  8e-98  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  358  8e-98  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  54.67 
 
 
294 aa  357  9.999999999999999e-98  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  54.67 
 
 
294 aa  357  9.999999999999999e-98  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_008528  OEOE_1449  glucose-1-phosphate thymidylyltransferase  56.46 
 
 
291 aa  357  9.999999999999999e-98  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1894  glucose-1-phosphate thymidylyltransferase  57.88 
 
 
292 aa  357  9.999999999999999e-98  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.284713  normal  0.0266706 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  56.94 
 
 
296 aa  357  1.9999999999999998e-97  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007912  Sde_2130  glucose-1-phosphate thymidylyltransferase  56.7 
 
 
288 aa  356  1.9999999999999998e-97  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  54.67 
 
 
294 aa  356  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  55.36 
 
 
292 aa  357  1.9999999999999998e-97  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_008261  CPF_0479  glucose-1-phosphate thymidylyltransferase  56.8 
 
 
293 aa  357  1.9999999999999998e-97  Clostridium perfringens ATCC 13124  Bacteria  normal  0.778561  n/a   
 
 
-
 
NC_009616  Tmel_1069  glucose-1-phosphate thymidylyltransferase  58.25 
 
 
296 aa  356  1.9999999999999998e-97  Thermosipho melanesiensis BI429  Bacteria  normal  0.69912  n/a   
 
 
-
 
NC_008347  Mmar10_2458  glucose-1-phosphate thymidylyltransferase  55.44 
 
 
291 aa  357  1.9999999999999998e-97  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  54.14 
 
 
292 aa  356  2.9999999999999997e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  54.98 
 
 
297 aa  356  2.9999999999999997e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  54.33 
 
 
294 aa  356  2.9999999999999997e-97  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  56.55 
 
 
291 aa  355  3.9999999999999996e-97  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  54.3 
 
 
297 aa  355  3.9999999999999996e-97  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_1726  glucose-1-phosphate thymidylyltransferase  57.24 
 
 
291 aa  355  5e-97  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00000315653  normal  0.563962 
 
 
-
 
NC_013517  Sterm_2411  glucose-1-phosphate thymidylyltransferase  57.68 
 
 
290 aa  355  5e-97  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000385967  n/a   
 
 
-
 
NC_008321  Shewmr4_1319  glucose-1-phosphate thymidylyltransferase  55.52 
 
 
291 aa  355  5.999999999999999e-97  Shewanella sp. MR-4  Bacteria  normal  normal  0.0322301 
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  54.33 
 
 
294 aa  355  5.999999999999999e-97  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  55.33 
 
 
292 aa  355  5.999999999999999e-97  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  55.02 
 
 
292 aa  353  1e-96  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  55.93 
 
 
293 aa  353  1e-96  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  57.64 
 
 
296 aa  353  1e-96  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_007796  Mhun_3075  glucose-1-phosphate thymidylyltransferase  56.12 
 
 
293 aa  354  1e-96  Methanospirillum hungatei JF-1  Archaea  normal  0.589168  normal  0.11788 
 
 
-
 
NC_009800  EcHS_A2181  glucose-1-phosphate thymidylyltransferase  56.16 
 
 
289 aa  353  2e-96  Escherichia coli HS  Bacteria  normal  0.112189  n/a   
 
 
-
 
NC_007514  Cag_0512  glucose-1-phosphate thymidylyltransferase, long form  53.74 
 
 
295 aa  353  2e-96  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  53.61 
 
 
312 aa  353  2e-96  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  53.82 
 
 
305 aa  353  2e-96  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  53.45 
 
 
296 aa  352  2.9999999999999997e-96  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_007512  Plut_0416  glucose-1-phosphate thymidylyltransferase, long form  56.36 
 
 
292 aa  352  2.9999999999999997e-96  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  55.67 
 
 
290 aa  353  2.9999999999999997e-96  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  54.64 
 
 
297 aa  352  2.9999999999999997e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_011094  SeSA_A4134  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  353  2.9999999999999997e-96  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.886764  normal 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  53.95 
 
 
297 aa  352  2.9999999999999997e-96  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  53.95 
 
 
293 aa  352  4e-96  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  53.61 
 
 
297 aa  352  4e-96  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_009975  MmarC6_0591  glucose-1-phosphate thymidylyltransferase  56.01 
 
 
291 aa  352  4e-96  Methanococcus maripaludis C6  Archaea  normal  0.600436  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  54.83 
 
 
293 aa  352  5e-96  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  54.83 
 
 
305 aa  352  5e-96  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  56.84 
 
 
289 aa  352  5e-96  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_009715  CCV52592_0305  glucose-1-phosphate thymidylyltransferase  56.55 
 
 
294 aa  352  5e-96  Campylobacter curvus 525.92  Bacteria  normal  0.132763  n/a   
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  53.95 
 
 
297 aa  352  5.9999999999999994e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  57.19 
 
 
290 aa  352  5.9999999999999994e-96  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  52.58 
 
 
293 aa  351  7e-96  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  55.67 
 
 
289 aa  351  1e-95  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  53.61 
 
 
297 aa  351  1e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  54.92 
 
 
293 aa  350  2e-95  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  54.92 
 
 
293 aa  350  2e-95  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  53.45 
 
 
296 aa  350  2e-95  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  53.61 
 
 
297 aa  350  2e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  55.36 
 
 
289 aa  350  2e-95  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  53.1 
 
 
296 aa  350  2e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  54.92 
 
 
310 aa  350  2e-95  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  53.79 
 
 
295 aa  349  3e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  53.26 
 
 
297 aa  349  3e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  54.79 
 
 
291 aa  349  3e-95  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  349  4e-95  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  349  4e-95  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  349  4e-95  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  349  4e-95  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  53.79 
 
 
292 aa  349  4e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  53.26 
 
 
297 aa  349  4e-95  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  54.58 
 
 
293 aa  349  4e-95  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  54.58 
 
 
293 aa  349  4e-95  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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