Gene Paes_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1726 
Symbol 
ID6459481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1884977 
End bp1885852 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content53% 
IMG OID642725715 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_002016391 
Protein GI194334531 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000315653 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.563962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA TTATACTTGC CGGGGGTTCG GGTACACGGT TGTATCCGGT GACGAAGGCG 
GTGTCGAAGC AGTTGCTGCC GATTTATGAT AAGCCGATGA TCTATTATCC TTTGAGTACG
CTGATGCTGG CGGGGATACG TGAGGTGCTG GTGATTTCGA CGCCTCAGGA TCTTCCGTTG
TTTGAGCGGG TGCTTGGTGA TGGGAGTGAT TGGGGGATCA GCTTGTCGTA TGTGGAGCAG
CCGTCACCGG ATGGTTTGGC TCAGGCGTTT CTGCTGGGTG ATGAGTTTAT CGGCGGGGAT
GATGTGTCGC TGATTCTGGG GGATAATATC TTTTTCGGGT ACGGGTTCAG CGGCATGCTG
AAGGATGCGG TTGAGAGCGT GCGCGAGGAG CGGGTGGCTA ATATTTTCGG TTATTATGTG
AATGATCCCG AGCGGTATGG GGTGGCTGAA TTTAATGAAT CGGGTCGGGT GCTGTCGATC
GAGGAGAAGC CATCGGATCC GAAGTCGAAT TATGCGGTGG TCGGGTTGTA TTTTTATCCG
AACGAGGTGG TTGAAGTGGC CAGGAGTGTG AAGCCGTCAG CGCGTGGGGA ACTGGAGATT
ACGTCGGTGA ATGAGGAGTT TCTCCGCCAG AACCGGTTGA AGATGTCGAT GTTAGGGCGC
GGTTTTGCGT GGCTTGATAC GGGAACGCAC GAGTCGTTTC AGGAAGCGGG TAATTTTATT
GAGACGGTGG AAAAACGCCA GGGGCTGAAG ATCGCTTGTC CGGAGGAGAT TGCCTGGCGC
AATAAATGGA TTGACGACGA TCGCCTTGAA GAACTTGCTG ATCCATTGAT GAAGAGCCAG
TACGGGGTGT ATTTGCGTCA GTTGCTGAAG CGTTGA
 
Protein sequence
MKGIILAGGS GTRLYPVTKA VSKQLLPIYD KPMIYYPLST LMLAGIREVL VISTPQDLPL 
FERVLGDGSD WGISLSYVEQ PSPDGLAQAF LLGDEFIGGD DVSLILGDNI FFGYGFSGML
KDAVESVREE RVANIFGYYV NDPERYGVAE FNESGRVLSI EEKPSDPKSN YAVVGLYFYP
NEVVEVARSV KPSARGELEI TSVNEEFLRQ NRLKMSMLGR GFAWLDTGTH ESFQEAGNFI
ETVEKRQGLK IACPEEIAWR NKWIDDDRLE ELADPLMKSQ YGVYLRQLLK R