Gene Mhun_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3075 
Symbol 
ID3922333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3348735 
End bp3349616 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content45% 
IMG OID637898685 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_504481 
Protein GI88604303 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.589168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.11788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAATAA AAGGAATAAT TCTCGCCGGA GGGGCAGGAA CCCGCCTGTA TCCCCTGACT 
AAAAGCATCT CAAAACATCT GCTCCCCATC TATGATAAAC CACTCATATA CTACCCGCTT
TCCGTCCTGA TGCTATCCGG AATCCGTGAT ATCCTCATCA TCTCCACACC CCGGGATCTT
CCCTTATACA AAGAACTCTT TGGAGACGGA GCGCAATATG GCCTCTCCCT TTCGTATGCG
ATACAGGAGG AACCACGTGG TCTTGCTGAT GCTTTTATCG TCGGTGAATC ATTTATTGGA
AAGGATCGGG TTGCCCTAAT ATTAGGAGAC AATATCTTTT ATGGGCAGCA TTTTTCAGAA
ATACTCCGGA GAGCAGTCTC CCGTGAGACT GGTGCTACTA TCTTCGGCTA TTATGTCCGC
GATCCCACCG CTTTTGGGGT AGTTGAATTT GATCCGGATG GAAAGGTTAT CTCTATCGAA
GAAAAACCAC AAAAACCAAA ATCTCATTAT GCGGTGCCCG GATTGTACTT CTATGATAAT
GACGTGGTAA CCATTGCAAA AGGTCTGAAA CCATCCGCAC GAGGTGAGAT TGAAATAACC
GATGTAAACA ACATCTACCT TTCCCGAGGT AATCTCATTG TTGAGTTATT TGGCAGAGGT
ATGGCATGGC TGGATTCAGG AACCCACGAT TCACTTCTCG AAGCATCTCA GTTTATTGAG
ACAATCCAGA AACGGCAGGG ATTATATGTG GCCTGTATCG AAGAGATAGC ATTCCAACAG
GGATACATAG ACAAACGTCA ACTCCTGGAA CTTGCACAAT GCCTGGATAA AACCGAATAT
GGTCAGTATC TTATCTCTCT TGCTCTTGGG AATGGAAGAT AG
 
Protein sequence
MTIKGIILAG GAGTRLYPLT KSISKHLLPI YDKPLIYYPL SVLMLSGIRD ILIISTPRDL 
PLYKELFGDG AQYGLSLSYA IQEEPRGLAD AFIVGESFIG KDRVALILGD NIFYGQHFSE
ILRRAVSRET GATIFGYYVR DPTAFGVVEF DPDGKVISIE EKPQKPKSHY AVPGLYFYDN
DVVTIAKGLK PSARGEIEIT DVNNIYLSRG NLIVELFGRG MAWLDSGTHD SLLEASQFIE
TIQKRQGLYV ACIEEIAFQQ GYIDKRQLLE LAQCLDKTEY GQYLISLALG NGR