More than 300 homologs were found in PanDaTox collection
for query gene Patl_2715 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_2715  acyl-CoA dehydrogenase-like  100 
 
 
391 aa  805    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.785448  n/a   
 
 
-
 
NC_007908  Rfer_4169  butyryl-CoA dehydrogenase  64.03 
 
 
383 aa  514  1e-144  Rhodoferax ferrireducens T118  Bacteria  normal  0.0614852  n/a   
 
 
-
 
NC_007908  Rfer_4181  butyryl-CoA dehydrogenase  64.03 
 
 
383 aa  514  1e-144  Rhodoferax ferrireducens T118  Bacteria  normal  0.0181503  n/a   
 
 
-
 
NC_010681  Bphyt_0615  acyl-CoA dehydrogenase domain protein  56.52 
 
 
387 aa  457  1e-127  Burkholderia phytofirmans PsJN  Bacteria  normal  0.210833  normal  0.0397055 
 
 
-
 
NC_007951  Bxe_A4085  putative acyl-CoA dehydrogenase  56.01 
 
 
387 aa  454  1.0000000000000001e-126  Burkholderia xenovorans LB400  Bacteria  normal  0.14575  normal 
 
 
-
 
NC_013739  Cwoe_4224  acyl-CoA dehydrogenase domain protein  49.75 
 
 
400 aa  394  1e-108  Conexibacter woesei DSM 14684  Bacteria  normal  0.0700017  normal  0.0824066 
 
 
-
 
NC_013510  Tcur_4635  acyl-CoA dehydrogenase domain protein  49.08 
 
 
386 aa  382  1e-105  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4228  isovaleryl-CoA dehydrogenase  46.75 
 
 
385 aa  376  1e-103  Mycobacterium sp. JLS  Bacteria  normal  0.950044  normal  0.66405 
 
 
-
 
NC_007777  Francci3_2430  acyl-CoA dehydrogenase-like  46.61 
 
 
385 aa  370  1e-101  Frankia sp. CcI3  Bacteria  decreased coverage  0.000440313  normal  0.478447 
 
 
-
 
NC_009921  Franean1_4054  acyl-CoA dehydrogenase domain-containing protein  46.61 
 
 
384 aa  366  1e-100  Frankia sp. EAN1pec  Bacteria  normal  normal  0.168546 
 
 
-
 
NC_014165  Tbis_2093  acyl-CoA dehydrogenase domain-containing protein  45.79 
 
 
398 aa  364  1e-99  Thermobispora bispora DSM 43833  Bacteria  normal  0.0300334  normal  0.0497691 
 
 
-
 
NC_013510  Tcur_2510  acyl-CoA dehydrogenase domain protein  45.15 
 
 
397 aa  362  8e-99  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0195405  n/a   
 
 
-
 
NC_009338  Mflv_0446  butyryl-CoA dehydrogenase  44.27 
 
 
385 aa  357  1.9999999999999998e-97  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.981915  normal 
 
 
-
 
NC_008146  Mmcs_0182  butyryl-CoA dehydrogenase  45.34 
 
 
385 aa  356  3.9999999999999996e-97  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0191  butyryl-CoA dehydrogenase  45.34 
 
 
385 aa  356  3.9999999999999996e-97  Mycobacterium sp. KMS  Bacteria  normal  0.297032  normal 
 
 
-
 
NC_009077  Mjls_0171  butyryl-CoA dehydrogenase  45.08 
 
 
385 aa  354  1e-96  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260341 
 
 
-
 
NC_013131  Caci_7768  acyl-CoA dehydrogenase domain protein  46.17 
 
 
397 aa  354  2e-96  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  47.71 
 
 
386 aa  351  1e-95  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_009077  Mjls_1740  acyl-CoA dehydrogenase domain-containing protein  46.02 
 
 
397 aa  347  2e-94  Mycobacterium sp. JLS  Bacteria  normal  0.0177648  normal 
 
 
-
 
NC_008146  Mmcs_1759  acyl-CoA dehydrogenase-like protein  46.02 
 
 
397 aa  347  2e-94  Mycobacterium sp. MCS  Bacteria  normal  0.218239  n/a   
 
 
-
 
NC_008705  Mkms_1806  acyl-CoA dehydrogenase domain-containing protein  46.02 
 
 
397 aa  347  2e-94  Mycobacterium sp. KMS  Bacteria  normal  normal  0.580831 
 
 
-
 
NC_009338  Mflv_4367  butyryl-CoA dehydrogenase  45.34 
 
 
397 aa  347  3e-94  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1977  butyryl-CoA dehydrogenase  45.85 
 
 
397 aa  346  4e-94  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4180  acyl-CoA dehydrogenase domain protein  42.71 
 
 
383 aa  341  1e-92  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2167  butyryl-CoA dehydrogenase  44.96 
 
 
399 aa  340  2.9999999999999998e-92  Frankia sp. CcI3  Bacteria  normal  0.592182  normal  0.710802 
 
 
-
 
NC_008699  Noca_4073  acyl-CoA dehydrogenase domain-containing protein  45.26 
 
 
386 aa  340  2.9999999999999998e-92  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1139  acyl-CoA dehydrogenase domain protein  45.48 
 
 
399 aa  340  2.9999999999999998e-92  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0221  butyryl-CoA dehydrogenase  44.13 
 
 
385 aa  339  5.9999999999999996e-92  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0556 
 
 
-
 
NC_014165  Tbis_2091  acyl-CoA dehydrogenase domain-containing protein  45.17 
 
 
386 aa  338  8e-92  Thermobispora bispora DSM 43833  Bacteria  normal  0.0244674  normal  0.176746 
 
 
-
 
NC_013441  Gbro_1523  acyl-CoA dehydrogenase domain protein  43.95 
 
 
397 aa  335  5.999999999999999e-91  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0413288  n/a   
 
 
-
 
NC_009921  Franean1_4031  acyl-CoA dehydrogenase domain-containing protein  45.22 
 
 
399 aa  333  4e-90  Frankia sp. EAN1pec  Bacteria  normal  0.328111  normal  0.707323 
 
 
-
 
NC_008699  Noca_1456  acyl-CoA dehydrogenase domain-containing protein  43.38 
 
 
398 aa  330  2e-89  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4533  acyl-CoA dehydrogenase domain-containing protein  44.7 
 
 
398 aa  330  3e-89  Frankia sp. EAN1pec  Bacteria  normal  0.0920452  normal 
 
 
-
 
NC_009953  Sare_0673  acyl-CoA dehydrogenase domain-containing protein  42.34 
 
 
400 aa  326  4.0000000000000003e-88  Salinispora arenicola CNS-205  Bacteria  normal  0.514226  normal 
 
 
-
 
NC_009380  Strop_0727  acyl-CoA dehydrogenase domain-containing protein  42.34 
 
 
398 aa  326  4.0000000000000003e-88  Salinispora tropica CNB-440  Bacteria  normal  normal  0.230975 
 
 
-
 
NC_009565  TBFG_10217  acyl-CoA dehydrogenase fadE3  43.58 
 
 
373 aa  315  9.999999999999999e-85  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  40.93 
 
 
390 aa  281  2e-74  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2068  acyl-CoA dehydrogenase domain protein  41.51 
 
 
385 aa  275  7e-73  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  42.06 
 
 
376 aa  275  7e-73  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  41.62 
 
 
383 aa  271  1e-71  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  39.74 
 
 
402 aa  270  4e-71  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  40.48 
 
 
376 aa  268  1e-70  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  41.41 
 
 
383 aa  267  2e-70  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  41.76 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  41.76 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  41.76 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  42.02 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  38.68 
 
 
375 aa  266  4e-70  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  41.76 
 
 
381 aa  266  5e-70  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  41.76 
 
 
381 aa  266  5e-70  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  41.49 
 
 
381 aa  266  5e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  41.49 
 
 
381 aa  266  5.999999999999999e-70  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  41.49 
 
 
381 aa  266  5.999999999999999e-70  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  41.49 
 
 
381 aa  266  5.999999999999999e-70  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  41.34 
 
 
380 aa  266  5.999999999999999e-70  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  41.49 
 
 
381 aa  265  8e-70  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  39.64 
 
 
383 aa  265  2e-69  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  38.42 
 
 
379 aa  264  2e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
375 aa  264  2e-69  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  38.42 
 
 
379 aa  263  3e-69  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  40.11 
 
 
375 aa  263  4e-69  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  40.79 
 
 
380 aa  263  4e-69  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  41.69 
 
 
375 aa  263  4e-69  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  40.21 
 
 
380 aa  262  6e-69  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  39.04 
 
 
380 aa  262  8e-69  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  37.89 
 
 
375 aa  261  1e-68  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
375 aa  261  1e-68  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  41.42 
 
 
379 aa  261  2e-68  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  40.48 
 
 
394 aa  260  2e-68  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  38.08 
 
 
379 aa  261  2e-68  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  41.05 
 
 
380 aa  261  2e-68  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  38.42 
 
 
379 aa  260  3e-68  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  39.3 
 
 
375 aa  259  4e-68  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  38.42 
 
 
375 aa  260  4e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  39.43 
 
 
379 aa  259  5.0000000000000005e-68  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_008025  Dgeo_0812  acyl-CoA dehydrogenase-like protein  40.05 
 
 
393 aa  257  2e-67  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  38.16 
 
 
375 aa  257  2e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  38.79 
 
 
385 aa  258  2e-67  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1318  acyl-CoA dehydrogenase domain protein  39.73 
 
 
384 aa  256  3e-67  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.0793911 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  39.58 
 
 
380 aa  256  3e-67  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  38.32 
 
 
386 aa  257  3e-67  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010725  Mpop_2186  acyl-CoA dehydrogenase domain protein  37.66 
 
 
562 aa  256  3e-67  Methylobacterium populi BJ001  Bacteria  normal  0.0552217  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  38.52 
 
 
385 aa  257  3e-67  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  41.78 
 
 
389 aa  256  4e-67  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  40.63 
 
 
379 aa  256  5e-67  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  40.63 
 
 
379 aa  256  7e-67  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
379 aa  255  9e-67  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  42.19 
 
 
375 aa  254  1.0000000000000001e-66  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  38.79 
 
 
376 aa  255  1.0000000000000001e-66  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  40.63 
 
 
379 aa  255  1.0000000000000001e-66  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  40.37 
 
 
379 aa  254  1.0000000000000001e-66  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  39.58 
 
 
379 aa  255  1.0000000000000001e-66  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  39.47 
 
 
376 aa  254  1.0000000000000001e-66  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  40.37 
 
 
379 aa  254  1.0000000000000001e-66  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  38.34 
 
 
386 aa  254  2.0000000000000002e-66  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  40.37 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_010172  Mext_2228  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
562 aa  254  2.0000000000000002e-66  Methylobacterium extorquens PA1  Bacteria  normal  0.489531  normal  0.489903 
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  37.99 
 
 
375 aa  254  2.0000000000000002e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_013037  Dfer_3002  acyl-CoA dehydrogenase domain protein  40 
 
 
388 aa  254  2.0000000000000002e-66  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2504  acyl-CoA dehydrogenase domain protein  37.4 
 
 
562 aa  253  3e-66  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0181987  normal 
 
 
-
 
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