| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3002 |
|---|
| Symbol | |
|---|
| ID | 8226575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3667268 |
|---|
| End bp | 3668434 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644930832 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003087382 |
|---|
| Protein GI | 255036761 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAC GAGAAAAAGA CCTGACTAAT AACCCATCCG ACGAGATTTG TAACCTCATT
AAAGAAACGG TCAGGGATTT CGCCGCGCTG CACATCAAAC CGCACATCCG CACCTGGGAC
GACCAACAGC ATTTTCCAAA GGAACTTTTC AGATCAATGG GCGAGCTCGG CCTCATGGGT
ATGCTCATTC CCGAAGCCCT CGGTGGCGCG GGCCTGGGCT ACCGCGAGTA CGTGACGGCG
ATCATCGAAC TGGCGAAGGT TGATCCGTCG GTAGCATTGT CGATGGCGGC ACATAATTCG
CTTTGTACCA ATCATATATA CATGTTCGGC AATGCCGCAC AGCATCAAAA ATACCTGCCG
GGCCTCGCCT CGGGCACGCT CGTGGGCGCA TGGGGGCTTA CGGAACCGAA TACGGGTTCC
GATGCCGGCA ATATGCGCAC GGTAGCCGTC CGGGATGGCG ACGATTGGGT GATCAACGGC
TCTAAAAACT TCATAACCAA CGGCAAAAGC GCCGACGTGC TCGTGGTCAT GACCCGCACC
GGCGAACCGG GCGACAAACA CGGAGCCACC GCATTCGTGC TCGATGCCGA CACGCCCGGG
TTCAGCGCGG GACGGAAGGA AGACAAGCTC GGTATGCGCG CTTCCGAAAC CGTGGAACTA
CTGTTCCAGG ACTGCCGCAT TCCCGACAGC CAGCGCCTGG GCGAAATCGG CGACGGGTTT
ATCCAGTCGT TGAAAGTGCT CGATGGCGGC CGTATTTCGA TTGCCGCGCT GGGCGTAGGT
ACTGCATTTG GCGCCTACGA GGCCGCATTG GCCTATTCCA AAGAGCGCAA GCAGTTCGGC
AAGGCCATCT GCGATTTCCA GGCGATTGCA TTCAAACTGG CCGACATGTA CACCGATGCG
CAAGCCTCTT CCCTGCTTAC ATTCCACGCT GCCTCATTGA AAGACGCCGG TGAAAAAGTG
ACGCTGGCAA GTTCGGTCGC GAAATACCAT TCTTCCGAAA CGGCGGTGCG TGTCGCCAAC
GATGCCGTGC AAATCTTTGG AGGTTATGGT TTTGTAAAAG ACTATCCCGC CGAAAAATTC
TATCGCGACA GCAAGCTCTG CACTATCGGC GAAGGCACGA GCGAAATCCA GAAAATGGTG
ATTTCAAAAG AAATACTGAG GAATTAA
|
|---|
| Protein sequence | MDTREKDLTN NPSDEICNLI KETVRDFAAL HIKPHIRTWD DQQHFPKELF RSMGELGLMG
MLIPEALGGA GLGYREYVTA IIELAKVDPS VALSMAAHNS LCTNHIYMFG NAAQHQKYLP
GLASGTLVGA WGLTEPNTGS DAGNMRTVAV RDGDDWVING SKNFITNGKS ADVLVVMTRT
GEPGDKHGAT AFVLDADTPG FSAGRKEDKL GMRASETVEL LFQDCRIPDS QRLGEIGDGF
IQSLKVLDGG RISIAALGVG TAFGAYEAAL AYSKERKQFG KAICDFQAIA FKLADMYTDA
QASSLLTFHA ASLKDAGEKV TLASSVAKYH SSETAVRVAN DAVQIFGGYG FVKDYPAEKF
YRDSKLCTIG EGTSEIQKMV ISKEILRN
|
|---|
| |